Gene Information

Name : SG1283 (SG1283)
Accession : YP_454963.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : type III secretion apparatus
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2156502 - 2157692 bp
Length : 1191 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAATCAGTGGCAAATTCGCCTGCTTGGAGGCGCTCTGCACGGTCGGGAAATCAAACTGCCCGACACTGGTCTGAC
GCTCGGTGAACGCGGCTGCGATGTTTGCCTGCCCCTGATAGGCACCGCCCGCGTGGCGTTGAGGATAGACGCCGGAAAAT
TATATGTCGATGCGGACGGCGCAGCGGCGCGGGTCAATGGCCGCCGGCATCGACAGGGCGTCGCACTGCCCGCGACAGGC
ATTTTACAGACCGCCGGCCTGACGCTGGCCTTTGGTTCGCCGCAAGACTGTCTAGCAGAGATGACGTTGCCGGCGCGTTA
CGGCGCTTTTCTCTGGACCGGCGCGATAGCGGTAGTGTTGCTGGCCACCTTACTGGCGGGTCTTTGGCTAAGCGGCGCGG
CGCGCGATAGCGGGCCCGGCATACCCGGATGGGTCGAGATGCTGTTACAGCAGCCTGGCATGGACAAAGTTAAAGCCGTG
TGGGCAGCGGATGGCGTGTTGACTTTGTCCGGCTACTGCGCCGAGGGAGCGCAGATGGGGGCCGCGCGGCTGAGACTGGC
GTCGTGGGGTGTGGTGTTTCGCGATCGGGTGGTACGTGGCGATCTGCTGGCCCGCGATGTTCAGGACCTGCTGCTGCAGG
CGGGTTATACAGGAGCACGGGTGCGCAGCACCGCGCCTGGCGAGGTGTGTATTCAGGGTGATATCACTATGGGTAAGCGC
TGGACTGCGGTGCTGCCGCAGTTACGGCTCATCCCTGGTCTACGACGCTGGCATATTGAGAATCGTCATGCAGTACAGAG
CCGAGCGATTATCTCGGCGCTGCGGGATAACGGGTTGCTGGCGGAGATTAGCGTGACCCCCGTCGGCGATGCGTTCACGT
TGAGTGGGGTGCTCGACGCACCGGGCAAGGCGCGTGTTATCAGGCTCCTTGACCGGCTGCGGACGCAATTTCCCGGTCTG
GCGCTTAGCTATCAGGCGGTGCCGGCGTCTGCCGACGGCGCACAGCGGCTGCCATCGCCGGCGGCGGGCATTATTCATAG
CCGTCACGGCGACTATCTGATGCTAGAAAATGGCGTTCGCCTGCAGGTCGGAAGTCAATTGCCGGACGGTGGCGAAGTGA
TTGCGCTCACCGATCGTGCCATCTCTATCCACTATCGCGGTACGCTAATTAATTACCCCTTTGATTTTTAA

Protein sequence : 
MNNQWQIRLLGGALHGREIKLPDTGLTLGERGCDVCLPLIGTARVALRIDAGKLYVDADGAAARVNGRRHRQGVALPATG
ILQTAGLTLAFGSPQDCLAEMTLPARYGAFLWTGAIAVVLLATLLAGLWLSGAARDSGPGIPGWVEMLLQQPGMDKVKAV
WAADGVLTLSGYCAEGAQMGAARLRLASWGVVFRDRVVRGDLLARDVQDLLLQAGYTGARVRSTAPGEVCIQGDITMGKR
WTAVLPQLRLIPGLRRWHIENRHAVQSRAIISALRDNGLLAEISVTPVGDAFTLSGVLDAPGKARVIRLLDRLRTQFPGL
ALSYQAVPASADGAQRLPSPAAGIIHSRHGDYLMLENGVRLQVGSQLPDGGEVIALTDRAISIHYRGTLINYPFDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaD YP_216403.1 secretion system apparatus protein SsaD Virulence SPI-2 Protein 4e-73 43
ssaD NP_456133.1 putative pathogenicity island protein Virulence SPI-2 Protein 4e-73 43
ssaD NP_805066.1 pathogenicity island protein Virulence SPI-2 Protein 4e-73 43
ssaD NP_460360.1 virulence protein Virulence SPI-2 Protein 8e-73 43
spiB AAC44302.1 SpiB Virulence SPI-2 Protein 1e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1283 YP_454963.1 type III secretion apparatus VFG0496 Protein 3e-73 43