Gene Information

Name : STBHUCCB_13710 (STBHUCCB_13710)
Accession : YP_005216929.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Secretion system apparatus protein ssaM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1346682 - 1347050 bp
Length : 369 bp
Strand : +
Note : similar to Secretion system apparatus protein ssaM of Enterobacteriaceae UniRef RepID=SSAM_SALTY

DNA sequence :

ATGGATTGGGATCTCATTACTGAACGTAATATTCAGCTTTTTATTCAATTAGCAGGATTAGCTGAACGGCCTTTAGCAAC
CAATATGTTCTGGCGGCAAGGACAATATGAAACCTGTCTAAACTATCATAATGGTCGTATTCACTTATGTCAGATACTCA
AGCAAACCTTCTTAGACGAAGAACTGCTTTTTAAAGCGTTGGCTAACTGGAAACCCGCAGCGTTCCAGGGTATTCCTCAA
CGATTATTTTTGTTGCGCGATGGGCTTGCAATGAGTTGTTCTCCACCTCTTTCCAGCTCCGCCGAGCTCTGGTTACGATT
ACATCATCGACAAATAAAATTTCTGGAGTCGCAATGCGTTCATGGTTAG

Protein sequence :

MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETCLNYHNGRIHLCQILKQTFLDEELLFKALANWKPAAFQGIPQ
RLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCVHG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY1707	NP_456115.1	putative pathogenicity island protein	Virulence	SPI-2	Protein	4e-53	100
ssaM	NP_805084.1	pathogenicity island protein	Virulence	SPI-2	Protein	4e-53	100
ssaM	NP_460378.1	type III secretion system apparatus protein	Virulence	SPI-2	Protein	3e-52	99
ssaM	YP_216421.1	secretion system apparatus protein SsaM	Virulence	SPI-2	Protein	6e-52	96

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
STBHUCCB_13710	YP_005216929.1	Secretion system apparatus protein ssaM	VFG0513	Protein	7e-53	99