Gene Information

Name : ssaM (STMUK_1379)
Accession : YP_005251917.1
Strain : Salmonella enterica UK-1
Genome accession: NC_016863
Putative virulence/resistance : Virulence
Product : type III secretion system apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1451470 - 1451838 bp
Length : 369 bp
Strand : +
Note : secretion system apparatus protein SsaM (SW:SSAM_SALTY)

DNA sequence :
ATGGATTGGGATCTCATTACTGAACGTAATATTCAGCTTTTTATTCAATTAGCAGGATTAGCTGAACGGCCTTTAGCAAC
CAATATGTTCTGGCGGCAAGGACAATATGAAACCTATCTAAACTATCATAACGGTCGTATTCACTTATGTCAGATACTCA
AGCAAACCTTCTTAGACGAAGAACTGCTTTTTAAAGCGTTGGCTAACTGGAAACCCGCAGCGTTCCAGGGTATTCCTCAA
CGATTATTTTTGTTGCGCGATGGGCTTGCAATGAGTTGTTCTCCACCTCTTTCCAGCTCCGCCGAGCTCTGGTTACGATT
ACATCATCGACAAATAAAATTTCTGGAGTCGCAATGCGTTCATGGTTAG

Protein sequence :
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETYLNYHNGRIHLCQILKQTFLDEELLFKALANWKPAAFQGIPQ
RLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCVHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaM NP_460378.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-53 100
STY1707 NP_456115.1 putative pathogenicity island protein Virulence SPI-2 Protein 3e-52 99
ssaM NP_805084.1 pathogenicity island protein Virulence SPI-2 Protein 3e-52 99
ssaM YP_216421.1 secretion system apparatus protein SsaM Virulence SPI-2 Protein 7e-53 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaM YP_005251917.1 type III secretion system apparatus protein VFG0513 Protein 8e-54 100