Name : ragA (RHECIAT_CH0001389) Accession : YP_001977547.1 Strain : Rhizobium etli CIAT 652 Genome accession: NC_010994 Putative virulence/resistance : Virulence Product : two-component response regulator protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1368283 - 1369038 bp Length : 756 bp Strand : + Note : - DNA sequence : ATGTTCGCGATGAGCGCCGCTCCGCAGCCAGATGCTTTGAGCCTTGCCGAAACGCAGCCGGTGGGTAATGTCGGCCGCAT GAAGATTCTCATCATCGAAGATGATCTCGAAGCCGCGGTCTACCTCACGAAAGCCTTTCGCGAGGCGGGCATTGTCGCCG ACCACGCCAGCGACGGCGAGAGCGGTCTGTTCATGGGATCGGAAAATACCTATGACGTCATCGTCATCGACCGCATGCTG CCGCGCCGCGACGGTCTCTCCGTCATCAGCGAGCTGCGCCGCAAGGGCGTCCATACGCCGGTGCTCATCCTCTCCGCGCT TGGCCAGGTCGATGATCGGGTGACCGGTCTTCGTGCCGGTGGCGACGATTACCTGCCGAAGCCCTATGCCTTCAGCGAAT TGCTGGCGCGTGTCGAGGTGCTCGGCCGCCGCAAGGGAACGCCGGAACAGGATGTCGTCTATCGCGTCGGTGATCTCGAA CTCGACCGGCTCTCCCACGAGGTGCGCCGCGGCGGCAAGGAAATCCCGCTGCAGCCGCGCGAATTCCGCCTGCTCGAATA TTTGATGAAAAATGCCGGCCAGGTGGTGACCCGCACCATGCTGCTCGAAAACGTCTGGGACTACCACTTCGACCCGCAGA CCAATGTCATCGACGTCCATGTCTCGCGCCTGCGCTCGAAGATCGAGAAGGACTTCAGCCAGCCGCTCCTGAAAACCATC CGGGGCGCGGGGTACATGATCAAGGACGAGGGATGA Protein sequence : MFAMSAAPQPDALSLAETQPVGNVGRMKILIIEDDLEAAVYLTKAFREAGIVADHASDGESGLFMGSENTYDVIVIDRML PRRDGLSVISELRRKGVHTPVLILSALGQVDDRVTGLRAGGDDYLPKPYAFSELLARVEVLGRRKGTPEQDVVYRVGDLE LDRLSHEVRRGGKEIPLQPREFRLLEYLMKNAGQVVTRTMLLENVWDYHFDPQTNVIDVHVSRLRSKIEKDFSQPLLKTI RGAGYMIKDEG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 6e-39 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ragA | YP_001977547.1 | two-component response regulator protein | BAC0125 | Protein | 2e-46 | 47 |
ragA | YP_001977547.1 | two-component response regulator protein | BAC0347 | Protein | 4e-46 | 46 |
ragA | YP_001977547.1 | two-component response regulator protein | BAC0083 | Protein | 4e-46 | 45 |
ragA | YP_001977547.1 | two-component response regulator protein | BAC0111 | Protein | 9e-49 | 45 |
ragA | YP_001977547.1 | two-component response regulator protein | BAC0308 | Protein | 4e-42 | 45 |
ragA | YP_001977547.1 | two-component response regulator protein | BAC0197 | Protein | 4e-43 | 44 |
ragA | YP_001977547.1 | two-component response regulator protein | BAC0638 | Protein | 1e-37 | 43 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ragA | YP_001977547.1 | two-component response regulator protein | VFG1389 | Protein | 7e-34 | 42 |
ragA | YP_001977547.1 | two-component response regulator protein | VFG0596 | Protein | 3e-39 | 41 |
ragA | YP_001977547.1 | two-component response regulator protein | VFG1390 | Protein | 1e-37 | 41 |