Gene Information

Name : STP_1380 (STP_1380)
Accession : YP_004479500.1
Strain : Streptococcus parauberis KCTC 11537
Genome accession: NC_015558
Putative virulence/resistance : Virulence
Product : response regulator protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1532054 - 1532740 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
ATGACTAAGAAAATTTTAATTGTTGAAGACGAAAAGAATCTAGCAAGATTTGTTTCTCTTGAATTACAACATGAAGGCTA
TGAAGTTAGTGTTGAAGTAAACGGTAGAGAAGGACTTGAAACTGCATTAGAAAAAGATTTTGATTTAATTCTGCTTGACT
TAATGCTTCCTGAGATGGATGGTTTTGAAGTTACTCGCCGCTTACAAACAGAAAAAACAACTTATATCATGATGATGACT
GCGCGTGATTCAATCATGGATGTTGTTGCAGGTCTTGACCGTGGTGCGGATGACTATATCGTAAAACCTTTTGCGATTGA
AGAATTGTTGGCACGTATTCGTGCAATCTTCCGTCGACAAGATATCGAAACTGAGAAGAAAGCGCCAAATCAAGGCGTTT
ACCGCGATTTAGTGTTAAATCCTCAAAATCGTTCAGTTAATCGTGGAGATGAAGAAATTTCATTAACAAAACGTGAATAT
GATTTATTAAATATTTTGATGACTAATATGAACCGTGTTATGACTCGTGAAGAGTTATTATCAAGTGTATGGAAGTATGA
TGAAGCTGTTGAAACAAACGTAGTTGATGTTTATATTCGTTATCTTCGTGGCAAAATTGATATGCCAGGAAGAGAATCTT
ACATCCAAACAGTTCGTGGAATGGGATATGTAATTCGCGAGAAATAA

Protein sequence :
MTKKILIVEDEKNLARFVSLELQHEGYEVSVEVNGREGLETALEKDFDLILLDLMLPEMDGFEVTRRLQTEKTTYIMMMT
ARDSIMDVVAGLDRGADDYIVKPFAIEELLARIRAIFRRQDIETEKKAPNQGVYRDLVLNPQNRSVNRGDEEISLTKREY
DLLNILMTNMNRVMTREELLSSVWKYDEAVETNVVDVYIRYLRGKIDMPGRESYIQTVRGMGYVIREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-36 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STP_1380 YP_004479500.1 response regulator protein HE999704.1.gene1528. Protein 2e-59 62
STP_1380 YP_004479500.1 response regulator protein NC_002951.3238224.p0 Protein 2e-51 54
STP_1380 YP_004479500.1 response regulator protein NC_007793.3914065.p0 Protein 2e-51 54
STP_1380 YP_004479500.1 response regulator protein NC_002758.1121390.p0 Protein 2e-51 54
STP_1380 YP_004479500.1 response regulator protein NC_010079.5776364.p0 Protein 2e-51 54
STP_1380 YP_004479500.1 response regulator protein NC_002952.2859858.p0 Protein 2e-51 54
STP_1380 YP_004479500.1 response regulator protein NC_007622.3794948.p0 Protein 2e-51 54
STP_1380 YP_004479500.1 response regulator protein NC_003923.1003417.p0 Protein 2e-51 54
STP_1380 YP_004479500.1 response regulator protein NC_013450.8614146.p0 Protein 2e-51 54
STP_1380 YP_004479500.1 response regulator protein AE015929.1.gene1106. Protein 4e-49 53
STP_1380 YP_004479500.1 response regulator protein NC_012469.1.7685629. Protein 3e-38 44
STP_1380 YP_004479500.1 response regulator protein BAC0125 Protein 5e-36 43
STP_1380 YP_004479500.1 response regulator protein AE016830.1.gene1681. Protein 6e-40 42
STP_1380 YP_004479500.1 response regulator protein BAC0197 Protein 1e-32 42
STP_1380 YP_004479500.1 response regulator protein AE000516.2.gene3505. Protein 8e-34 41
STP_1380 YP_004479500.1 response regulator protein HE999704.1.gene2815. Protein 2e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STP_1380 YP_004479500.1 response regulator protein VFG1390 Protein 4e-41 43
STP_1380 YP_004479500.1 response regulator protein VFG0596 Protein 1e-36 43
STP_1380 YP_004479500.1 response regulator protein VFG1389 Protein 2e-35 41