Gene Information

Name : SRM_01418 (SRM_01418)
Accession : YP_003571291.1
Strain : Salinibacter ruber M8
Genome accession: NC_014032
Putative virulence/resistance : Virulence
Product : Aldehyde dehydrogenase, mitochondrial precursor
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1607566 - 1609155 bp
Length : 1590 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGAACTAGAGGCCGCCCCCAACACCGCTCGCGAGCTGCTCTTCGGCGACGAATGGGAGTACGCCCCCGCCCCGCA
GTCCGCCGACCACGTGCGCCTGGACGACCGCTACGGGCCCTTCATCGACGGGGAATTCCGGGAAGTGGACGAGTACTTCC
CGTCGATCAACCCGGCCACGGAGGAGCCGCTCGCGGAGGTCGGGCTCGCCGACGAGGCCGTCGTCGACGAGGCCGTCGGG
GCCGCCCGGACGGCGTACGAGTCGCACTGGCGCGACCTGCCCGGAAAAGAGCGGGCGAAATACATCTATCGGATCGGGCG
GATGATCAAGGAAAAGTCCCGCGAGTTCGCGGTGCTGGAGTCGATGGACGGGGGCAAGCCGATCCGCGAGTCGCGCGACA
TGGACATCCCCCTGGTGGCGGCCCACTTCTTCCACTACGCCGGCTGGGCCGACAAGCTGGAGTACGCCCTGCCGGGCCCG
GGCCGGCCCCGCTCGCTGGGCGTGTGCGGCCAGATCATCCCCTGGAACTTTCCGCTCCTGATGGCGGCGTGGAAGCTGGC
CCCGGCCCTCGCCACGGGCAACACCGTCGTGCTGAAGCCCGCCGAGACGACGCCCCTCACGGCCCTCAAGCTCGCCGAGG
TAATGCAGGAGGCGGGCCTGCCGCCCGGCGTCGTCAACATCGTGCAGGGGGCCGGCGAGGTGGGCTCCGCCCTCGTGGAG
CACCCGGACGTCGACAAGATTGCGTTTACCGGCTCCACCGGGGTCGGCAAGCACATCCAGAAGCAGCTCGCCGGGACGAA
GAAGCGCCTCACGCTGGAGCTGGGGGGGAAGGGGGCCAACATCGTCTTCGAGGACGCGCCCATCGACCAGGCCGTGGAGG
GCATCGTGGACGGCATCTACTTCAACCAGGGGCACGTCTGCTGTGCGGGGTCGCGGCTGCTGGTCCAGGAGAGCGTGGCG
GAGGAGGTGACCCGGAAGCTGCGGGACCGCATCGCGACGCTCCGGGTGGGCGACCCGCTCGACAAGAACACCGACATCGG
GGCGATCAACTCGAAGCCACAGCTGGAGAAGATCCGCCGCCTCGTAGACGTCGGCGAGCGGGAGGGCGCCGACAAGTTCC
AGCCGGAGTGCGACCTGCCGGACGACGGCTTCTGGTTCCCGCCCACGTTCTTCACCAACGTGACGCAGTCCCACCGCATC
GCGCAGGAGGAGATTTTTGGTCCCGTCCTGTCGGTCACCACGTTCCGGACCCCGGAGGAGGCGGTCGAGCGCGCCAACAA
CACCGAGTACGGCCTCGCCTCTGGCATCTGGAGCGACAAGGGCTCGAAACTCTTCTCGATCTCGCAGGCGCTGAAAAGCG
GCGTGGTCTGGGGCAATACCTACAACAAGTTCGACCCCGCCAGCCCCTTCGGCGGCTACAAGGAAAGCGGCTTCGGCCGC
GAGGGGGGCATGCACGGTCTTCTTCCGTACCTTGAACGTCCATCGCAGTCATGGCAGCCACAGACGCCCACGAACGGCTC
CCCGTCTACAAAACCCGCAAGCTCTACATCGGCGGGGGCTTCCCCCGAACCGAAAGCGGACGATACATAA

Protein sequence :
MAELEAAPNTARELLFGDEWEYAPAPQSADHVRLDDRYGPFIDGEFREVDEYFPSINPATEEPLAEVGLADEAVVDEAVG
AARTAYESHWRDLPGKERAKYIYRIGRMIKEKSREFAVLESMDGGKPIRESRDMDIPLVAAHFFHYAGWADKLEYALPGP
GRPRSLGVCGQIIPWNFPLLMAAWKLAPALATGNTVVLKPAETTPLTALKLAEVMQEAGLPPGVVNIVQGAGEVGSALVE
HPDVDKIAFTGSTGVGKHIQKQLAGTKKRLTLELGGKGANIVFEDAPIDQAVEGIVDGIYFNQGHVCCAGSRLLVQESVA
EEVTRKLRDRIATLRVGDPLDKNTDIGAINSKPQLEKIRRLVDVGEREGADKFQPECDLPDDGFWFPPTFFTNVTQSHRI
AQEEIFGPVLSVTTFRTPEEAVERANNTEYGLASGIWSDKGSKLFSISQALKSGVVWGNTYNKFDPASPFGGYKESGFGR
EGGMHGLLPYLERPSQSWQPQTPTNGSPSTKPASSTSAGASPEPKADDT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-67 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-65 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-59 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-69 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-69 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-69 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SRM_01418 YP_003571291.1 Aldehyde dehydrogenase, mitochondrial precursor VFG0082 Protein 2e-67 43