Gene Information

Name : GDI_1456 (GDI_1456)
Accession : YP_001601712.1
Strain : Gluconacetobacter diazotrophicus PAl 5
Genome accession: NC_010125
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1457769 - 1458449 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGCATATCCTGGTCGTCGAGGATGATCCGACCGTCCGCAATTTCGTCGCCAAGGGCCTGCGCGAGGCCGGGCACCTGGT
CGAGCCGGTGGACAACGGCAAGGACGGGCTGTTCCTGGCGGTCAGCGAGAATTTCGACCTGATCATCCTGGACCGCATGC
TACCGGGCGGGATCGACGGGCTGCGGCTGCTGGAAACCATCCGCGCGCAGAACAACAGCACGCCGGTCCTGCTGCTGTCG
GCGCTGGCGGACGTGGATGACCGCGTGCAGGGCCTGAAGGCCGGCGGCGACGATTACGTCACCAAGCCCTTCGCCTTCAG
CGAATTGCTGGCCCGGGTCGAGGCCCTGTCGCGCCGGGGGCGCAGCGACAACGCGCCGCTGACGCGCCTGAACGTGGCGG
ACCTGGAAATCGACCTGCTGTCGCGGTCGTCCGCCGCGGCGGGCAGCCGCATCGACCTGCAGCCCCGCGAATTCCGGCTG
CTGGAATACCTGATGCGCAATGCCGGCCAGGTCGTGACGCGCACCATGCTGCTGGAAGGCGTGTGGGACTATCATTTCGA
CCCGCAGACCAACGTCATCGACGTCCATGTGTCCCGCCTGCGCCAGAAGGTGGACAAGCCGTTCGATACCCCCCTGATCC
ATACCATCCGCAACGCCGGCTACATGCTGCGGGCGGAATAG

Protein sequence : 
MHILVVEDDPTVRNFVAKGLREAGHLVEPVDNGKDGLFLAVSENFDLIILDRMLPGGIDGLRLLETIRAQNNSTPVLLLS
ALADVDDRVQGLKAGGDDYVTKPFAFSELLARVEALSRRGRSDNAPLTRLNVADLEIDLLSRSSAAAGSRIDLQPREFRL
LEYLMRNAGQVVTRTMLLEGVWDYHFDPQTNVIDVHVSRLRQKVDKPFDTPLIHTIRNAGYMLRAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-38 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-37 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GDI_1456 YP_001601712.1 two-component response regulator BAC0638 Protein 7e-37 51
GDI_1456 YP_001601712.1 two-component response regulator BAC0125 Protein 2e-41 50
GDI_1456 YP_001601712.1 two-component response regulator BAC0083 Protein 4e-41 48
GDI_1456 YP_001601712.1 two-component response regulator BAC0111 Protein 3e-42 48
GDI_1456 YP_001601712.1 two-component response regulator BAC0197 Protein 4e-39 48
GDI_1456 YP_001601712.1 two-component response regulator BAC0347 Protein 2e-38 47
GDI_1456 YP_001601712.1 two-component response regulator BAC0308 Protein 1e-37 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GDI_1456 YP_001601712.1 two-component response regulator VFG0596 Protein 3e-38 46
GDI_1456 YP_001601712.1 two-component response regulator VFG1389 Protein 1e-28 41