Gene Information

Name : dmpC (GHH_c14810)
Accession : YP_007401763.1
Strain : Geobacillus sp. GHH01
Genome accession: NC_020210
Putative virulence/resistance : Virulence
Product : 2-hydroxymuconic semialdehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.-
Position : 1491118 - 1492593 bp
Length : 1476 bp
Strand : +
Note : -

DNA sequence :
ATGAAAACAGAAGTGGTAGCCAGCGAGAAAGTAAAGGCATTTGATTGCCAACATTTCATCAACGGGCGGTTTTTGCCTTC
ACAAAGCGGCAAGATGTTTCAAAACATTAATCCCGCTACGGGGGAAGTGATCGGCACCGTCTGTGAAGGGGGGAAAGAAG
AGATTGATTTGGCGGTGGCCGCTGCAAAAAGGGCGCTTAGCGGACCGTGGAAGAGAATGACGACTGGGGAGCGGATCGCA
GTTTTGCGCCGTATCGGCGATCTCATTTTAGAGCGCAAAGAGGAACTGGCTCGCCTCGAGTCTCTCGATACGGGGAAGCC
ATACTCTCTCTCCCTCACGTTGGATATTCCGCGGGCAGCGTATAACTTCCACTTTTTCGCCGACTACTTGCGATCGGTCG
GCACGGAAGCGTATCAGACCGATGAGGTGGCCATCAACTATTCGATCCGCCGACCGGTCGGGGTCGTCGGACTGATCAAT
CCGTGGAATTTGCCGTTGCTGTTGTTGACGTGGAAGCTCGCCCCGTGTTTGGCAGCCGGGAACACGGCCGTCATCAAGCC
GGCGGAATGGACGCCGCTCACCGCAACTGTATTGGCCGAAATTTGCAAAGAAGCCGGGGTGCCGGATGGCGTTGTGAATG
TTGTTCATGGCTTTGGTCCGGATTCGGCAGGGGCGGCGTTGACTGAGCACCCGGATGTTGACGCCATTACGTTCACTGGA
GAGACAACAACTGGAAAAGTCATTATGGCGGCGGCGGCGAAATCATTGAAAAAGCTGTCTTACGAGTTGGGAGGGAAAAA
TCCGAACATCATTTTCGCCGATGCGGATTTGGACGAAGCGATCGAGACGACGTTGAAATCGAGTTTTATGAACCAAGGGG
AAGTGTGTCTGTGCGGGTCAAGAATTTATGTAGAGCGGCCGCTTTATGAACAATTTTTGCAAAATTTTGTGGCCAAAACG
AAAGAACTCGTTGTCGGCGATCCGTTTGATCCGAGAACAAATGTCGGCGCGCTCATCAGCGAAGAGCATTACGAACGGGT
GATGAGCTACATCGAGCTGGCGAAGGAGGAAGGCGGTCGTATTTTAACCGGTGGAAAGCGGCCGGACGGCTTGGATCAAG
GATATTATCTTGAACCGACGATTATTGTCGGTGTCAACCGAAATTGCCGCATCGTCCGCGAAGAAGTGTTCGGACCGGTC
GTGACGGTCATGCCGTTTGACGAAGAAGAGGAAGTGATCGCCCAAGCGAACGACACCCACTACGGATTGAGCGCGACGAT
TTGGACGAACGATTTGCGTCGGGCGCACCGGGTGGCGGCGCGCATTGAAGCCGGAATCGTTTGGGTCAATACGTGGTTTT
TACGTGATTTGCGCACACCGTTTGGCGGTATGAAACAAAGCGGCATCGGGCGCGAAGGCGGCATGCATAGCTTTGAGTTT
TATACAGAATTGACGAACATTTGCATTAAGCTTTAG

Protein sequence :
MKTEVVASEKVKAFDCQHFINGRFLPSQSGKMFQNINPATGEVIGTVCEGGKEEIDLAVAAAKRALSGPWKRMTTGERIA
VLRRIGDLILERKEELARLESLDTGKPYSLSLTLDIPRAAYNFHFFADYLRSVGTEAYQTDEVAINYSIRRPVGVVGLIN
PWNLPLLLLTWKLAPCLAAGNTAVIKPAEWTPLTATVLAEICKEAGVPDGVVNVVHGFGPDSAGAALTEHPDVDAITFTG
ETTTGKVIMAAAAKSLKKLSYELGGKNPNIIFADADLDEAIETTLKSSFMNQGEVCLCGSRIYVERPLYEQFLQNFVAKT
KELVVGDPFDPRTNVGALISEEHYERVMSYIELAKEEGGRILTGGKRPDGLDQGYYLEPTIIVGVNRNCRIVREEVFGPV
VTVMPFDEEEEVIAQANDTHYGLSATIWTNDLRRAHRVAARIEAGIVWVNTWFLRDLRTPFGGMKQSGIGREGGMHSFEF
YTELTNICIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 7e-85 47
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-65 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-65 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-67 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-67 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-67 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-67 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dmpC YP_007401763.1 2-hydroxymuconic semialdehyde dehydrogenase VFG0082 Protein 5e-66 42