Gene Information

Name : SeHA_C1531 (SeHA_C1531)
Accession : YP_002045401.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : secretion system effector protein SseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1489449 - 1490039 bp
Length : 591 bp
Strand : +
Note : identified by match to protein family HMM PF03433

DNA sequence : 
ATGTCTTCAGGAAACATCTTATGGGGAAGTCAAAACCCTATTGTGTTTAAAAATAGCTTCGGCGTCAGTAACACTGATAC
AGGAAGTCAGGATGACTTATCTCAGCAAAATCCGTTTGCCGAAGGGTATGGTGTTTTGCTTATTCTCCTTATGGTTATTC
AGGCTATCGCAAACGATAAATTTATTGAAGTCCAGAAGAACGCTGAACGTGCCAGAAATACCCAGGAAAAGTCAAATGAG
ATGGATGAGGTGATTGCTAAAGCAGCCAAAGGGGATGCTAAAACCAAAGAGGAGGTGCCTGAGGACGTAATTAAATACAT
GCGCGATAATGGTATTCTCATCGATGGTATGACCATTGATGAATATATGGCTAAATATGGCGATCATGGGAAGCTGGATA
AAGGTGGTCTACAGGCGGTCAAAGCGGCTTTGGATAATGACGCCAACCGGAATACCGATCTTATGAGTCAGGGGCAGATA
ACAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACCCAACTGACAGGGCTTATCAGTAAGTGGGGGGAAATTTC
CAGTATGATAGCGCAGAAAACGTACTCATGA

Protein sequence : 
MSSGNILWGSQNPIVFKNSFGVSNTDTGSQDDLSQQNPFAEGYGVLLILLMVIQAIANDKFIEVQKNAERARNTQEKSNE
MDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGMTIDEYMAKYGDHGKLDKGGLQAVKAALDNDANRNTDLMSQGQI
TIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 2e-86 99
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 3e-86 98
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 3e-86 98
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 3e-86 98
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 2e-86 98
sseB CAA12185.1 SseB Virulence SPI-2 Protein 2e-86 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C1531 YP_002045401.1 secretion system effector protein SseB VFG0499 Protein 7e-87 98