Gene Information

Name : RSal33209_1504 (RSal33209_1504)
Accession : YP_001624654.1
Strain : Renibacterium salmoninarum ATCC 33209
Genome accession: NC_010168
Putative virulence/resistance : Virulence
Product : 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.60
Position : 1288217 - 1289632 bp
Length : 1416 bp
Strand : -
Note : -

DNA sequence :
GTGTTGGACCCGGTATCCAACACGACGTACACCACCGCTGCGGCTGGCCAAAAAGAAGATATTGATACCGCCGTCGCCGC
TGCTCGCGAGGCTTTCCGCACTGGCACCTGGCCACGGATGAAGCCGCGGGAACGTGCTCGGGTGCTGAACCGGATTGCCG
ACGCCGTCGAAGCCCAAGAAGACCGACTCGCTGAGTTAGAGACCTTCGACACTGGCCTGCCGATTAAGCAAGCTCGTGGC
CAGGCACAGCGCGCCGCGGAGAATTTCCGCTTCTTTGCCGACTTGATCGTTGCCCAGTTCGACGACGCGATGAAGGTCCC
GGGCGCTCAGATCAACTATGTGAACCGCAAGCCAATCGGTGTCGCCGGCCTGATCACGCCATGGAACACACCGTTCATGC
TGGAGTCGTGGAAGCTTGCCCCCGCACTAGCCACCGGTAACTGTGTAGTGCTCAAACCTGCGGAGTTCACGCCGCTCTCC
GCATCACTCTGGGCAACGATCTTCAAAGACGCTGGACTGCCCGACGGCGTGTTCAACTTGGTCAATGGGCTGGGCGAAGA
GGCTGGCGATGCTTTGGTCAAGCACCCCGATGTTCCACTGATCTCCTTCACCGGCGAAACCACTACCGGGCAGACCATTT
TCCGAAATGCAGCAGCCGGACTCAAAGGACTCTCGATGGAACTCGGCGGCAAATCCCCTGCCGTCATCTTTGCAGACGCC
GATCTGGACGCCGCCATTGATTCGACGCTGTTCGGCGTCTTCTCACTTAACGGTGAGCGTTGCACCGCCGGTTCGCGAAT
TTTGGTACACCGCAGCGTGTATGACGATTTCTGCGAGCGCTATGCCGAGCGGGCCAAGAACATCGTCGTCGGCGATCCGC
ACGATCCGGCCACTGAAGTCGGCGCGCTGGTGCACCCGGAGCACTACGCCAAAGTGATGTCCTACGTGGAGATCGGCAAG
ACCGAGGGAAGGTTGCTTGCGGGCGGCGGCCGTCCGGAGAATCTGCCTGCTGGGCAAGAAAACGGCAGTTACGTCTCCCC
CACAGTATTTGCCGACGTTGCCCCCAGTGCCCGGATCTTCCAGGAAGAAATCTTCGGCCCGGTAGTAGCAATTACGCCAT
TCGACACCGATGAAGAGGCGCTCGAACTAGCCAACGGCGTGAAATATGGTCTGGCTGCTTACATCTGGACGCAAGATCTC
ACCCGCGCTCACAACTTTGCGCAAAACGTTGAAGCCGGAATGGTCTGGCTCAATTCGTATAACGTGCGTGATCTGCGCAC
GCCTTTTGGCGGCGTCAAGTCCTCGGGGCTGGGCCATGAGGGCGGCTACCGTTCGATTGACTTCTACACCGACCAGCAAG
CCGTGCACATCACGCTGGGTGCTGTACACACGCCAAAATTTGGAGCTTCCCGATGA

Protein sequence :
MLDPVSNTTYTTAAAGQKEDIDTAVAAAREAFRTGTWPRMKPRERARVLNRIADAVEAQEDRLAELETFDTGLPIKQARG
QAQRAAENFRFFADLIVAQFDDAMKVPGAQINYVNRKPIGVAGLITPWNTPFMLESWKLAPALATGNCVVLKPAEFTPLS
ASLWATIFKDAGLPDGVFNLVNGLGEEAGDALVKHPDVPLISFTGETTTGQTIFRNAAAGLKGLSMELGGKSPAVIFADA
DLDAAIDSTLFGVFSLNGERCTAGSRILVHRSVYDDFCERYAERAKNIVVGDPHDPATEVGALVHPEHYAKVMSYVEIGK
TEGRLLAGGGRPENLPAGQENGSYVSPTVFADVAPSARIFQEEIFGPVVAITPFDTDEEALELANGVKYGLAAYIWTQDL
TRAHNFAQNVEAGMVWLNSYNVRDLRTPFGGVKSSGLGHEGGYRSIDFYTDQQAVHITLGAVHTPKFGASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-100 50
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-69 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-71 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-71 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-71 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-71 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSal33209_1504 YP_001624654.1 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase VFG0082 Protein 5e-72 41