Gene Information

Name : SeHA_C1545 (SeHA_C1545)
Accession : YP_002045415.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : secretion system apparatus protein SsaL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1497795 - 1498760 bp
Length : 966 bp
Strand : +
Note : identified by match to protein family HMM PF07018; match to protein family HMM TIGR02511

DNA sequence :
ATGACGCCCCCTACAGCATTTACCCCTGGCCAGGTTATAGAGGAACAAGAGGTTATTTCGCCTTCAATGTTAGCTCTCCA
GGAGTTACAGGAAACGACGGGGGCAGCGCTCTATGAGACGATGGAAGAAATAGGAATGGCGCTGAGTGGTAAACTGCGCG
AAAATTATAAATTCACTGATGCTGAGAAACTGGAGCGCAGACAGCAGGCTTTGCTGCGTTTGATAAAACAAATACAGGAG
GATAATGGGGCAACGTTGCGTCCGCTTACCGAAGAGAATAGTGATCCTGATTTACAGAATGCGTATCAAATTATCGCTCT
TGCAATGGCGCTTACTGCCGGCGGGTTGTCAAAAAAGAAAAAACGCGATTTGCAATCGCAACTGGATACGCTTACAGCGG
AGGAGGGATGGGAACTTGCCGTTTTTAGTTTACTGGAACTTGGCGAAGTGGATACCGCTACGCTGTCCTCTCTGAAACGT
TTTATGCAACAGGCGATAGACAACGATGAAATGCCCTTATCGCAGTGGTTCAGACGCGTGGCAGACTGGCCGGATCGCTG
TGAACGGGTCCGTATTTTGCTAAGAGCCATAGCCTTTGAACTTAGCATATGCATCGAACCTTCGGAGCAAAGTCGTTTGG
CCGCAGCATTAGTACGTTTGCGTCGTTTGCTGTTATTCCTTGGCCTTGAAAAAGAGTGCCAGCGTGAGGAGTGGATTTGC
CAGTTGCCGCCTAATACATTACTGCCGCTACTACTCGATATCATTTGTGAGCGCTGGCTTTTCAGTGATTGGTTGCTTGA
TAGACTTACCGCTATAGTTTCTTCATCGAAGATGTTCAATCGGTTACTCCAACAACTTGATGCGCAGTTTATGCTGATAC
CCGATAACTGTTTTAACGACGAAGATCAACGTGAACAAATTCTCGAAACGCTTCGTGAAGTAAAGATAAATCAGGTTTTA
TTCTGA

Protein sequence :
MTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEEIGMALSGKLRENYKFTDAEKLERRQQALLRLIKQIQE
DNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVDTATLSSLKR
FMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEKECQREEWIC
QLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETLREVKINQVL
F

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaL CAA70534.1 secretion system apparatus Virulence SPI-2 Protein 1e-127 99
ssaL YP_216420.1 secretion system apparatus protein SsaL Virulence SPI-2 Protein 1e-126 99
ssaL NP_460377.1 type III secretion system apparatus protein Virulence SPI-2 Protein 2e-127 99
ssaL NP_456116.1 putative secretion system protein Virulence SPI-2 Protein 8e-124 98
ssaL NP_805083.1 secretion system protein Virulence SPI-2 Protein 8e-124 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C1545 YP_002045415.1 secretion system apparatus protein SsaL VFG0512 Protein 8e-128 99