Gene Information

Name : MY9_1454 (MY9_1454)
Accession : YP_006231247.1
Strain : Bacillus sp. JS
Genome accession: NC_017743
Putative virulence/resistance : Virulence
Product : two-component response regulator YkoH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1441491 - 1442177 bp
Length : 687 bp
Strand : +
Note : COGmatches:COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; PfamMatches:PF00072.18

DNA sequence :
TTGGACAAAGGACACATATTAATTGTGGAAGATGAAGAAAAAATCGCCAGGGTTCTGCAGCTTGAATTGGAATATGAAGG
ATACGACGTGACCATTAAACACAATGGAACAGAAGGCCTGAATGCGGCCGCGGAAGGCGGGTATTCCTTGGTGCTTCTTG
ATGTCATGCTGCCGGGGCTTAGCGGACTAGAAGTGCTGCGCCGTTTGAGAAAAACGGATCAACAGACACCGGTCATTTTA
TTAACGGCGCGAGACAGCATTCCTGATAAGGTAACAGGTCTGGATATCGGTGCGAATGACTATGTCACCAAGCCGTTTGA
AATCGAGGAATTACTTGCGAGAATCAGGGCGGCGCTGCGCCAAAATGGAACAAAAACGGAAGAAATCGGCACCTTTCTTA
CATATGACGATTTACGGGTGAACGAAAAAACCCGTGAAGTGAGACGCGGAGACAAAGAGGTGGAATTAACGCCGCGGGAA
TTTGATTTGCTCGTCTACATGCTAAAGCATCCGCAGCAAGTGCTGACACGGGAGCAAATTCTAAGCGCGGTATGGGGATT
TGATTATATCGGTGATACAAATGTCGTAGACGTCTACATAAGATACATCAGAAAAAAACTGGACTATCCTTACGAAAAAC
AGCTGATCCATACGATTCGCGGGGTCGGCTATGCCATTAAGGGGTAA

Protein sequence :
MDKGHILIVEDEEKIARVLQLELEYEGYDVTIKHNGTEGLNAAAEGGYSLVLLDVMLPGLSGLEVLRRLRKTDQQTPVIL
LTARDSIPDKVTGLDIGANDYVTKPFEIEELLARIRAALRQNGTKTEEIGTFLTYDDLRVNEKTREVRRGDKEVELTPRE
FDLLVYMLKHPQQVLTREQILSAVWGFDYIGDTNVVDVYIRYIRKKLDYPYEKQLIHTIRGVGYAIKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-42 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-42 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MY9_1454 YP_006231247.1 two-component response regulator YkoH NC_007793.3914065.p0 Protein 3e-46 47
MY9_1454 YP_006231247.1 two-component response regulator YkoH NC_002758.1121390.p0 Protein 3e-46 47
MY9_1454 YP_006231247.1 two-component response regulator YkoH NC_010079.5776364.p0 Protein 3e-46 47
MY9_1454 YP_006231247.1 two-component response regulator YkoH NC_002952.2859858.p0 Protein 3e-46 47
MY9_1454 YP_006231247.1 two-component response regulator YkoH NC_007622.3794948.p0 Protein 3e-46 47
MY9_1454 YP_006231247.1 two-component response regulator YkoH NC_003923.1003417.p0 Protein 3e-46 47
MY9_1454 YP_006231247.1 two-component response regulator YkoH NC_013450.8614146.p0 Protein 3e-46 47
MY9_1454 YP_006231247.1 two-component response regulator YkoH NC_002951.3238224.p0 Protein 3e-46 47
MY9_1454 YP_006231247.1 two-component response regulator YkoH HE999704.1.gene1528. Protein 1e-44 47
MY9_1454 YP_006231247.1 two-component response regulator YkoH BAC0125 Protein 3e-44 46
MY9_1454 YP_006231247.1 two-component response regulator YkoH AE015929.1.gene1106. Protein 3e-40 45
MY9_1454 YP_006231247.1 two-component response regulator YkoH BAC0308 Protein 2e-44 45
MY9_1454 YP_006231247.1 two-component response regulator YkoH BAC0197 Protein 1e-41 44
MY9_1454 YP_006231247.1 two-component response regulator YkoH BAC0083 Protein 9e-45 43
MY9_1454 YP_006231247.1 two-component response regulator YkoH NC_012469.1.7686381. Protein 1e-41 42
MY9_1454 YP_006231247.1 two-component response regulator YkoH BAC0638 Protein 2e-37 42
MY9_1454 YP_006231247.1 two-component response regulator YkoH AE016830.1.gene1681. Protein 2e-40 42
MY9_1454 YP_006231247.1 two-component response regulator YkoH FJ349556.1.orf0.gene Protein 3e-35 41
MY9_1454 YP_006231247.1 two-component response regulator YkoH NC_012469.1.7685629. Protein 3e-35 41
MY9_1454 YP_006231247.1 two-component response regulator YkoH BAC0111 Protein 3e-41 41
MY9_1454 YP_006231247.1 two-component response regulator YkoH BAC0347 Protein 2e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MY9_1454 YP_006231247.1 two-component response regulator YkoH VFG0596 Protein 4e-43 45
MY9_1454 YP_006231247.1 two-component response regulator YkoH VFG1390 Protein 2e-49 44
MY9_1454 YP_006231247.1 two-component response regulator YkoH VFG1386 Protein 7e-49 44
MY9_1454 YP_006231247.1 two-component response regulator YkoH VFG1389 Protein 1e-42 42