Gene Information

Name : M062_07705 (M062_07705)
Accession : YP_008131986.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1625965 - 1626654 bp
Length : 690 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCGGGTACTGATTGTCGAGGACGAGGCGAAGACGGCGGACTACCTGAACCGTGGCCTCAGCGAACAGGGGTTCACCGT
GGACCTGGCGGACAACGGCATCGACGGTCGCCACCTGGCGCTCCATGGCGAGTACGACGTGATCGTGCTCGACGTGATGC
TGCCGGGCGTCGACGGCTACGGCGTTCTGCGGGCGTTGCGCGAGCGGCGGCAGACCCCGGTGATCATGCTCACCGCGCGC
GAGCGCGTGGAAGACCGGGTGCGCGGGCTGCGCGAGGGCGCCGACGACTACCTGATCAAGCCGTTCTCCTTCCTCGAACT
GGTCGCCCGCCTGCAGGCCCTGACCCGGCGCGGCGGCAACCATGAAAGCCATTCGCAGATGCGCATCGCCGACCTGTCCA
TCGACCTGCTCAGCCGCAAGGTCTTCCGTGGCAACACCCGTCTGGAGCTGACTGCCAAGGAGTACGCGCTGCTCTGCGTG
CTGGCCCAGCGCAGCGGCGAGATCCTGTCGAAGACGGCGATCGCCGAACTGGTCTGGGACATCAACTTCGATACCGACAC
CAATGTCGTGGAGGTGGCGATCAAGCGCCTGCGCGCCAAGCTCGACGGTCCGTTCGAGAACAAGCTGCTGCATACCATCC
GGGGCATGGGCTACGTCCTGGAGAACCGTGCGCTGGCGGAGTCGGGCTGA

Protein sequence :
MRVLIVEDEAKTADYLNRGLSEQGFTVDLADNGIDGRHLALHGEYDVIVLDVMLPGVDGYGVLRALRERRQTPVIMLTAR
ERVEDRVRGLREGADDYLIKPFSFLELVARLQALTRRGGNHESHSQMRIADLSIDLLSRKVFRGNTRLELTAKEYALLCV
LAQRSGEILSKTAIAELVWDINFDTDTNVVEVAIKRLRAKLDGPFENKLLHTIRGMGYVLENRALAESG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-54 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-53 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_07705 YP_008131986.1 transcriptional regulator BAC0125 Protein 2e-65 61
M062_07705 YP_008131986.1 transcriptional regulator BAC0638 Protein 3e-55 57
M062_07705 YP_008131986.1 transcriptional regulator BAC0197 Protein 3e-59 56
M062_07705 YP_008131986.1 transcriptional regulator BAC0083 Protein 1e-58 56
M062_07705 YP_008131986.1 transcriptional regulator BAC0111 Protein 1e-60 55
M062_07705 YP_008131986.1 transcriptional regulator BAC0308 Protein 1e-55 54
M062_07705 YP_008131986.1 transcriptional regulator BAC0347 Protein 4e-55 52
M062_07705 YP_008131986.1 transcriptional regulator AE015929.1.gene1106. Protein 4e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_07705 YP_008131986.1 transcriptional regulator VFG0596 Protein 2e-54 54
M062_07705 YP_008131986.1 transcriptional regulator VFG1389 Protein 2e-36 44
M062_07705 YP_008131986.1 transcriptional regulator VFG1390 Protein 2e-38 43
M062_07705 YP_008131986.1 transcriptional regulator VFG1386 Protein 2e-35 42