Gene Information

Name : SARI_01589 (SARI_01589)
Accession : YP_001570625.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0642
EC number : -
Position : 1536979 - 1539789 bp
Length : 2811 bp
Strand : +
Note : 'KEGG: sec:SC1413 0. ssrA; secretion system regulator:sensor component K00873; COG: COG0784 FOG: CheY-like receiver; Psort location: endoplasmic reticulum, score: 9'

DNA sequence :
GTGATCAAGCACCAAATATTTTGCAACTGGAAACTGAAGGAAGGTATTATGAATTTACTGAACCTGAAGAATACGCTGCA
AACTTCTTTAGTAACCAGGCTAACTTTTTTATTTTTATTAACAACGATAATTATTTGGCTGCTATCCGTGTTTGCAGCAG
CTTATATATCAATGGCTCAGAACAGGAAGCATATAATGGAGGACTTATCCACTATCTCCGAGATGAATATTGTACTAAAC
AATCAACGTTTTGAAGAAGCTGAGCGTGACGCCCAAAAGTTAATGTATCAATGTTCATTTGCGACTGTTATTCGCCATAA
CAATACTTTTCCTGGGGTTAGTCGGCATCTGCCTGTAGGTCCCCCAAATTGCACGCCAACGCTAAACCGAGATAAGCCTC
GTATTTTTCCACAGCCCTATGATATCGATGAAGAAAATAATCATCGCGATCATTTTATCCTTAACCATAAAAATGAGATT
TCATTATTACCGGCTAATGCCCCCTCAGGGTATTCTACTCTACAGCTTATGACACTAAGACGTTTACCTTTATACCCGAA
CCATGCAGGGTTTTACTGGAGCAAACCAGAATACATAAACGGCAAAGGATGGAATGTTTCTGTTGCAGTTACCGATCAGC
ATGGCGTATTTTTTGGAGTGACTGTTGACCTACATAATCTCATTACCAATAACCATCCACAATTAGATGATAGTATTCAT
GTGTGGCTAGATCAGAACAATCACTTATTACCGTTTTCATACGCATCTCAAAAAATACGTACACGGTTAGAAAATGTAAC
GTTGCATGATGGATGGCAACAAATTCCAGGTTTTCTGATATTACGCACGACCCTGCATGGCCCCGGTTGGAGTCAGGTTA
TTTTGTACCCATACGGTAATCTATCTAGTCGCATCTTAAAAACTATCATTCAACAAATCCCCTTTACGTTAACAGCGTTG
GTGTTGATGACGTCAACTTTTTGTTGGTTACTCCATAGCTTACTGGCCAAACCGTTATGGCATTTTGTCGATGCCATTAA
TAAAACCGCAACTGAACCGCTGAGCACACGTTTGCCAGAAGAACGACAAGATGAATTAGGTAGTATTGCCTACGCTTTTA
ACCAACTGCTTAACACCCTACAAGTACAATACGACAATCTGGAAAGTAAAGTTGCAGAACGTACCCACGCGCTAAATGAG
GCAAAAAAGCGAGCCGAGCAAGCTAACAAACGTAAAAGCATTCATCTTACGGTAATAAGTCATGAGTTACGTACCCCGAT
GAATGGCGTACTCGGTGCGATTGAATTATTACAAACTACTCCTTTAAATATAAAACAGCAAGGATTAGCAGATACAGCCA
GGTATTGTACATTGTCTTTACTAACTCTTATTAATAATCTGCTGGATTTTTCACGCATCGAATCTGGTCATTTCACATTG
CATATGGAAGAAACGGCGTTACTTCCGTTACTGGACCAGACCATGCAAACCATCCAGGGACCAGCGCAAAGCAAAAAGTT
GTCATTACGTACTTTTGTCGGTCAACATGTTCCCCTTTATTTCCACACCGACGCTATCCGTTTACGTCAAATTTTGGTTA
ATTTACTCGGAAATGCGGTAAAATTTACCGAAACCGGAGGGATCCGTCTGACGGTTAAACGTCATGCGGAACAATTAATA
TTTCTAGTTAGCGACAGCGGTAAAGGGATTGAAATACAACAGCAGCCTAAAATATTTACTGCTTTTTATCAAGCGGACAC
AAATTCGCAAGGTACGGGTATTGGACTCACTATTGCTTCAAGCCTGGCTAAAATGATGGGCGGTGAATTAAAAATAGATA
GTATCCCCGGGGTTGGAACCTGTATATCGCTAGTATTACCTTTACAAGAATACCAGCCGCCTCAACCTATTAATGGTACA
CTGTCCGCCCCTATCTGCTTGCATCGTCAACTTGCCTGCTGGGGGATACGCGGTGAACTATCCCACCAGCAAAATGCGCT
TTTCAACGCAGAACTTCTGTATTTCCCCGGAAAACTCTATAACCTAGCACAACAATTAATATTATGTACTCCGAATACTC
CAGACATAAATAAATTGGTACAACCCTGGCAATTACAGATTCTTCTGGTTGATGATGCCGATATTAATCGGGACATCATC
GGCAGAATGCTTGTCAGTCTGGGCCAAAATGTCACCATTGCAGCCAGTAGTAACGAGGCCCTGACTTTATCGCAACAACA
GCGATTTGATTTAGTACTAATGGATATTAGAATGCCAGAAATAGATGGCATTGAATGTGTACAATTATGGCATGATAACC
CGGCTAATTTAGATCCTGACTGCATGATTGTGGCGCTATCAGCTAGCGTTGCTTCAGAAGATATTAACCGTTGTAAAAAA
CATGGGATACATCATTACATTACAAAACCTGTGACATTAGCTACCCTGGCTCGCTATATCAGTATCGCTGCAGAATACCA
GCTTTTACGAAATATCGAACTGCAGGAGCAAGATCCAAGCCGCTGTTCAGCGTTACTGGCAACAGATGATATAGACATTA
ATAGCAAGATTTTCCAATCACTGGACCTCTTGTTATCGGATATTGAAAGTGCTGTGTCTACTGGAAAAAAAGTCGATCAG
TTACTTCACACATTAAAAGGCTGTTTAGGTCAAGCAGGGCAGACTGAATTGGCGTGCTATGTAGCAGATATTGAGTATCG
AGTAAATATGGGGAAAATCATCACCATGGAGGAACTAACCAACCTACGCCAGAAAGTACGCATAATTTTTAACAACTACA
CCATTACTTAA

Protein sequence :
MIKHQIFCNWKLKEGIMNLLNLKNTLQTSLVTRLTFLFLLTTIIIWLLSVFAAAYISMAQNRKHIMEDLSTISEMNIVLN
NQRFEEAERDAQKLMYQCSFATVIRHNNTFPGVSRHLPVGPPNCTPTLNRDKPRIFPQPYDIDEENNHRDHFILNHKNEI
SLLPANAPSGYSTLQLMTLRRLPLYPNHAGFYWSKPEYINGKGWNVSVAVTDQHGVFFGVTVDLHNLITNNHPQLDDSIH
VWLDQNNHLLPFSYASQKIRTRLENVTLHDGWQQIPGFLILRTTLHGPGWSQVILYPYGNLSSRILKTIIQQIPFTLTAL
VLMTSTFCWLLHSLLAKPLWHFVDAINKTATEPLSTRLPEERQDELGSIAYAFNQLLNTLQVQYDNLESKVAERTHALNE
AKKRAEQANKRKSIHLTVISHELRTPMNGVLGAIELLQTTPLNIKQQGLADTARYCTLSLLTLINNLLDFSRIESGHFTL
HMEETALLPLLDQTMQTIQGPAQSKKLSLRTFVGQHVPLYFHTDAIRLRQILVNLLGNAVKFTETGGIRLTVKRHAEQLI
FLVSDSGKGIEIQQQPKIFTAFYQADTNSQGTGIGLTIASSLAKMMGGELKIDSIPGVGTCISLVLPLQEYQPPQPINGT
LSAPICLHRQLACWGIRGELSHQQNALFNAELLYFPGKLYNLAQQLILCTPNTPDINKLVQPWQLQILLVDDADINRDII
GRMLVSLGQNVTIAASSNEALTLSQQQRFDLVLMDIRMPEIDGIECVQLWHDNPANLDPDCMIVALSASVASEDINRCKK
HGIHHYITKPVTLATLARYISIAAEYQLLRNIELQEQDPSRCSALLATDDIDINSKIFQSLDLLLSDIESAVSTGKKVDQ
LLHTLKGCLGQAGQTELACYVADIEYRVNMGKIITMEELTNLRQKVRIIFNNYTIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spiR AAC44299.1 SpiR Virulence SPI-2 Protein 0.0 86
ssrA YP_216400.1 secretion system regulator:sensor component Virulence SPI-2 Protein 0.0 86
ssrA NP_456136.1 putative two-component sensor kinase Virulence SPI-2 Protein 0.0 86
ssrA NP_805063.1 two-component sensor kinase Virulence SPI-2 Protein 0.0 86
ssrA NP_460357.1 sensor kinase Virulence SPI-2 Protein 0.0 85
YPO0256 YP_002345336.1 two-component sensor/regulator Not tested Not named Protein 6e-171 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_01589 YP_001570625.1 hypothetical protein VFG0493 Protein 0.0 85