Gene Information

Name : RORB6_07810 (RORB6_07810)
Accession : YP_007873805.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1747687 - 1748367 bp
Length : 681 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGCGCCTGTTGTTAGTCGAAGATGAAGAAAAAACGTCAACCTATCTCAGCCGTGCGCTGGGTGAGTCCGGATTTACGGT
CGATATCTCTGCCGATGGCGCTGAGGGCCTTCATTACGCGCTGGAGTTTGACTACGACGCCATCATCCTGGATGTGATGC
TGCCGGGGATGGATGGCTACCGGGTACTCGAGGGGGTACGAGCCGTCAAACAGACGCCGGTGCTGATGCTCTCTGCACGG
GGATCGGTCGACGAACGGGTCAAAGGACTTCGCCTTGGCGCTGATGATTATCTCCCCAAGCCCTTTTCACTTATTGAGCT
GGTGGCGCGTATTCAGGCCCTGGTGCGGCGCCGCTCTGTGGACGGTGCAGACATCACCCAGCTGCACATTCACGATCTGC
ATCTCGACTTACTGGCTCGCCGGGTATTTCGCGCCGGAACGCGACTGGAACTGACCGCAAAAGAGTTTTCCCTGCTGAGC
CTTCTCTCCCGCCATCAGGGAGAAATTCTGTCCAAGATGATGATTGCTGAGCAGGTATGGGACATGAATTTTGACAGCGA
TGCCAACGTGGTTGAAGTCGCCATTAAACGTCTGCGCGCCAAAGTGGATGCCCCGTTCGACATCAAGCTACTTCATACCG
TTCGTGGTATGGGGTACGTCCTTGAAGTCCGCGCTGAATAA

Protein sequence :
MRLLLVEDEEKTSTYLSRALGESGFTVDISADGAEGLHYALEFDYDAIILDVMLPGMDGYRVLEGVRAVKQTPVLMLSAR
GSVDERVKGLRLGADDYLPKPFSLIELVARIQALVRRRSVDGADITQLHIHDLHLDLLARRVFRAGTRLELTAKEFSLLS
LLSRHQGEILSKMMIAEQVWDMNFDSDANVVEVAIKRLRAKVDAPFDIKLLHTVRGMGYVLEVRAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-50 51
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-49 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_07810 YP_007873805.1 two component heavy metal response transcriptional regulator BAC0083 Protein 5e-56 60
RORB6_07810 YP_007873805.1 two component heavy metal response transcriptional regulator BAC0125 Protein 4e-59 60
RORB6_07810 YP_007873805.1 two component heavy metal response transcriptional regulator BAC0197 Protein 8e-55 58
RORB6_07810 YP_007873805.1 two component heavy metal response transcriptional regulator BAC0638 Protein 9e-52 57
RORB6_07810 YP_007873805.1 two component heavy metal response transcriptional regulator BAC0111 Protein 3e-55 53
RORB6_07810 YP_007873805.1 two component heavy metal response transcriptional regulator BAC0308 Protein 7e-51 50
RORB6_07810 YP_007873805.1 two component heavy metal response transcriptional regulator BAC0347 Protein 2e-47 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_07810 YP_007873805.1 two component heavy metal response transcriptional regulator VFG0596 Protein 9e-51 51
RORB6_07810 YP_007873805.1 two component heavy metal response transcriptional regulator VFG1389 Protein 5e-36 47
RORB6_07810 YP_007873805.1 two component heavy metal response transcriptional regulator VFG1390 Protein 6e-35 44
RORB6_07810 YP_007873805.1 two component heavy metal response transcriptional regulator VFG1386 Protein 1e-33 43