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Name : STY1710 Accession : NP_456118.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Virulence Product : putative pathogenicity island protein Function : - COG functional category : - COG ID : - EC number : - Position : 1635138 - 1635686 bp Length : 549 bp Strand : - Note : Region similar to Salmonella typhimurium secretion system apparatus protein SsaK SW:SSAK_SALTY (P74853) (314 aa) fasta scores: E(): 1.1e-21, 85.5% id in 69 aa. Note discrepency in predicted translational start and stop site. DNA sequence : GTGTTGCAACTTTATCGTTATTTCTGGCAACCTGCTCGTTACGCTGTACCGGAATGGCTGGATAAGCTGGGCTTTCATCT TTCAAACTGCTGGCGTTATGGCGATCGGCCCAAATTGGATCGTCTTCTTGACAGAGCGTTAAATAGACTAAGGGGAAGCT CTGTTATTCCAGCCTGTTTAAATGACAGGCAAAAACGACAGATTCGTCTTGCGCCGCGTATATCGGCATTTGCCTTTGGA CTGGGATTATTCAAACTCAGGTGTAGTGACTATTTTATGCTACCAGAGTATCGGCAATTGCTTCTACAGTGGTTTAGCGA GGATGAGATCTGGCAGCTATATGGTTGGTTGGGGCAAAGAGATGGCAAATTACTTCCTCCGCAAGTGATGCAACAAACTG CATTGCAGATCGGTACCGCCATTCTTAATCGGGAAGCGCATGACGATGCGGTTTTACATGCGCTATTAGTATTATTACCC CCTCCGCAGCGTATACTTTGGCCGAAGACTTCTCTTACCGAGATTATCTTCATGGAGCATTTGCTATGA Protein sequence : MLQLYRYFWQPARYAVPEWLDKLGFHLSNCWRYGDRPKLDRLLDRALNRLRGSSVIPACLNDRQKRQIRLAPRISAFAFG LGLFKLRCSDYFMLPEYRQLLLQWFSEDEIWQLYGWLGQRDGKLLPPQVMQQTALQIGTAILNREAHDDAVLHALLVLLP PPQRILWPKTSLTEIIFMEHLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY1710 | NP_456118.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 4e-65 | 100 |
| t1278 | NP_805081.1 | pathogenicity island protein | Not tested | SPI-2 | Protein | 4e-65 | 100 |
| SC1431 | YP_216418.1 | hypothetical protein | Not tested | SPI-2 | Protein | 6e-64 | 99 |
| STM1410 | NP_460375.1 | hypothetical protein | Not tested | SPI-2 | Protein | 1e-64 | 99 |
