Gene Information

Name : Rpdx1_1584 (Rpdx1_1584)
Accession : YP_004107937.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1677697 - 1679238 bp
Length : 1542 bp
Strand : -
Note : KEGG: bja:bll2968 NAD-dependent succinate aldehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase

DNA sequence :
ATGGCTGATGCCGCTACGCCCCCTTCCGGATTCCAGGCCAATCTCGACCGCGCCGCACCGCTGCTGAAGCAACTCAAGGC
CGATGGCATCGGCCATCTTATCGGCGGCGAGATCGTTGCGGCCTCATCCGGCGAGGTGTTCGAGACGGCCTCGCCGATCG
ACAATGCGGTGCTGGCGCAGGTGGCGCGCGGCACGGCGGCGGACATCGACCGCGCCGCAAAGGCCGCCAAGGCCGCGTTT
CCGGCGTGGCGCGACATGGCGCCCGCCAGGCGGCGCAAACTGCTGCACAGGATCGCCGATGCGATCGAAGCGCGCGCCGA
CGACATCGCGGTGCTGGAATGCATCGATACCGGCCAGGCGCATCGCTTCATGGCCAAGGCCGCGATCCGCGCCGCCGAGA
ACTTCCGGTTCTTCGCCGACAAATGCGCCGAGGCGCGGGATGGGCTGAACACGCCGAGCGACGAGCATTGGAACGTCTCG
ACCCGGGTGCCGATCGGACCGGTCGGAGTGATCACGCCGTGGAACACGCCGTTCATGCTGTCGACCTGGAAGATCGCCCC
CGCGCTCGCCGCCGGCTGCACCGTGGTGCACAAGCCGGCCGAGTGGTCGCCGGTGACGGCCGACATGCTGGCTCGGATCT
GCAAGGACGCCGGCCTGCCGGACGGCGTGCTCAACACCGTGCACGGCTACGGCGAAGAGGCCGGCAAGGCGCTGACCGAG
CATCCCGCCATCAAGGCGATCGCCTTCGTCGGCGAAACGGCCACCGGCGCCGCGATCATGGCGCAGGGCGCACCGACGCT
GAAGCGGGTGCACTTCGAACTCGGCGGCAAGAACCCGGTGATTGTGTTCGACGACGCCGATCTCGACCGCGCGCTCGATG
CCGTGGTGTTCATGATCTACTCGCTCAACGGCGAACGCTGCACCTCGTCGAGCCGGCTGCTGGTGCAGGCTTCGATAGCC
GACGAATTTATCGAGAAGCTGGCTGCTCGGGTGCGCGCGCTCAAGGTGGGCCACCCGCTCGATCCGGCCACCGAAGTCGG
TCCGCTGATCCATCAGCGCCATCTCGACAAGGTCTGCTCCTATGTCGACGTCGCCCGCAAAGACGGCGCGACCATCGCGG
TCGGCGGCGCGCCTTACGACGGCCCCGGCGGCGGCCACTATGTGCAGCCGACGCTGGTGACGAATGCCCGCAGCGACATG
CAGGTGGCGCAGGACGAGGTGTTCGGCCCGTTCCTCACGGTAATCCCGTTCAAGGACGAGGCCGAGGCGGTTCAAATCGC
CAACGATGTCCGCTATGGCCTCACCGGCTATGTCTGGACCGGCGACATGGGCCGCGCGCTGCGCGTCGCCGATGCGCTCG
AAGCCGGGATGATCTGGCTGAATTCCGAGAACGTCCGCCATCTGCCGACGCCGTTCGGCGGCATGAAGCAATCCGGCATC
GGCCGCGACGGCGGCGACTACTCGTTCGAGTTCTACATGGAGACCAAGCACGTCTCGCTGGCCCGCGGCACCCACAAGAT
TCAGAAGCTGGGAGTGGTGTGA

Protein sequence :
MADAATPPSGFQANLDRAAPLLKQLKADGIGHLIGGEIVAASSGEVFETASPIDNAVLAQVARGTAADIDRAAKAAKAAF
PAWRDMAPARRRKLLHRIADAIEARADDIAVLECIDTGQAHRFMAKAAIRAAENFRFFADKCAEARDGLNTPSDEHWNVS
TRVPIGPVGVITPWNTPFMLSTWKIAPALAAGCTVVHKPAEWSPVTADMLARICKDAGLPDGVLNTVHGYGEEAGKALTE
HPAIKAIAFVGETATGAAIMAQGAPTLKRVHFELGGKNPVIVFDDADLDRALDAVVFMIYSLNGERCTSSSRLLVQASIA
DEFIEKLAARVRALKVGHPLDPATEVGPLIHQRHLDKVCSYVDVARKDGATIAVGGAPYDGPGGGHYVQPTLVTNARSDM
QVAQDEVFGPFLTVIPFKDEAEAVQIANDVRYGLTGYVWTGDMGRALRVADALEAGMIWLNSENVRHLPTPFGGMKQSGI
GRDGGDYSFEFYMETKHVSLARGTHKIQKLGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-82 45