Gene Information

Name : SC1424 (SC1424)
Accession : YP_216411.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Virulence
Product : secretion system chaperone protein SscB
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG5010
EC number : -
Position : 1525213 - 1525647 bp
Length : 435 bp
Strand : +
Note : IPR001440: TPR repeat

DNA sequence :
ATGATGATGAAAGAAGATCAGAAAAATAAAATACCCGAAGACATTCTGAAACAGCTATTATCCGTTGATCCGGAAACCGT
TTATGCCAGTGGTTACGCCTCATGGCAGGAGGGGGATTATTCGCGCGCCGTAATCGATTTTAGTTGGCTGGTGATGGCCC
AGCCATGGAGTTGGCGTGCCCATATTGCATTGGCTGGCACCTGGATGATGCTTAAAGAATACACGACGGCCATTAATTTC
TATGGACATGCCTTGATGCTGGATGCCAGCCATCCAGAACCGGTTTACCAAACGGGCGTCTGTCTCAAAATGATGGGGGA
ACCCGGGTTGGCGAGAGAGGCTTTTCAAACCGCAATCAAGATGAGTTATGCGGATGCCTCATGGAGTGAGATTCGCCAGA
ATGCGCAAATAATGGTTGATACTCTTATTGCTTAA

Protein sequence :
MMMKEDQKNKIPEDILKQLLSVDPETVYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINF
YGHALMLDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQNAQIMVDTLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1424 YP_216411.1 secretion system chaperone protein SscB Virulence SPI-2 Protein 5e-63 100
sscB NP_460368.1 secretion system chaperone Virulence SPI-2 Protein 5e-63 100
sscB AAC28884.1 SscB Virulence SPI-2 Protein 4e-63 100
sscB CAA12190.1 SscB Virulence SPI-2 Protein 4e-63 100
sscB NP_456125.1 putative pathogenicity island protein Virulence SPI-2 Protein 2e-62 99
sscB NP_805074.1 pathogenicity island protein Virulence SPI-2 Protein 2e-62 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SC1424 YP_216411.1 secretion system chaperone protein SscB VFG0504 Protein 2e-63 100