Gene Information

Name : ssaO (SC1437)
Accession : YP_216424.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Virulence
Product : secretion system apparatus protein SsaO
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1534629 - 1535060 bp
Length : 432 bp
Strand : +
Note : -

DNA sequence : 
ATGCGGACCCGAGCTACTTATAGAAAAATTACACCAAATACTCACCGAGTGATCATGGAAACTTTGCTGGAGATAATCGC
GCGGCGTGAAAAGCAATTACGCGGCAAGCTTACCGTACTTGATCAGCAGCAACAGGCGATTATTACGGAACAGCAGATTT
GCCAGACGCGCGCTTTAGCAGTGTCTACCAGACTGAAAGAATTAATGGGCTGGCAAGGTACGTTATCTTGTCATTTATTG
TTGGATAAGAAACAACAAATGGCCGGGTTATTCACTCAGGCGCAGAGCTTTTTGACGCAACGGCAGCAGTTAGAGAATCA
GTATCAGCAGCTTGTCTCCCGGCGAAGCGAATTACAGAAGAATTTTAATGCGCTTATGAAAAAGAAAGAAAAAATTACTA
TGGTATTAAGCGATGCGTATTACCAAAGTTGA

Protein sequence : 
MRTRATYRKITPNTHRVIMETLLEIIARREKQLRGKLTVLDQQQQAIITEQQICQTRALAVSTRLKELMGWQGTLSCHLL
LDKKQQMAGLFTQAQSFLTQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSDAYYQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaO NP_460381.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-37 100
ssaO YP_216424.1 secretion system apparatus protein SsaO Virulence SPI-2 Protein 2e-46 100
ssaO CAA70538.1 secretion system apparatus Virulence SPI-2 Protein 2e-37 100
ssaO AAX49618.1 SsaO Virulence SPI-2 Protein 1e-31 99
ssaO NP_456112.1 putative type III secretion protein Virulence SPI-2 Protein 8e-37 99
ssaO NP_805087.1 type III secretion protein Virulence SPI-2 Protein 8e-37 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaO YP_216424.1 secretion system apparatus protein SsaO VFG0516 Protein 8e-38 100