Gene Information

Name : ttrC
Accession : NP_456143.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : tetrathionate reductase subunit C (membrane protein)
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG3301
EC number : -
Position : 1656231 - 1657253 bp
Length : 1023 bp
Strand : +
Note : Similar to Salmonella typhimurium tetrathionate reductase subunit C TtrC TR:Q9Z4S7 (EMBL:AJ224978) (340 aa) fasta scores: E(): 0, 98.2% id in 340 aa

DNA sequence :
ATGACGCATTCACTCATCATTGAAGAAGTGCTGGCTCACCCGCAGGACATTAGCTGGCTGCCGTGGGCGGTACAATATTT
CTTTTTTATTGGCATTGCCGCCTGCGCCGCACTGTTTGCCTGTTATCTTCACTGGCGGAAAAAAGACGCCGCAACAGAAG
AAAATCGGGCATTACTGATTGCCATTACCTGTGCGATTACCGCACCGCTGGCGCTGACGGCGGATCTGCACCAGACCGCC
CGCGTCTGGCATTTCTATGCCTGGCCGACGCCCTGGTCGTGGATGCCCTGGGGAGCGTTGTTCCTGCCGCTGTTTACCGG
ATTTCTCGCTCTGTGGTTCCTGGCGCAGCAAATAAAACGATTATTCAATAAAAGTTACAACGTCACTAAATGGTTGGCGT
TAGCCAGCGCGCTTTGCGCGGTGGGCCTGTTGATTTATACCGGCCGCGAAGTCTCCGTTGTGCTGGCGCGCCCAATCTGG
TTTAGCTACGCCTTCCCCGTGGCGATGTTTCTTAGCGCCTTACAGGCGTTCTTCGCGCTGATGATTGTCGCCGCCCGACG
CGACTCGGTAAGGCTGCCAAAAATACTGTGGGGACAACTCTGGACGCTGGCGGCGCTGGGGCTGGTTGTGGCCATGTGGG
TCAGCGGCGATACGCTTTCCGGCACGGCAATCCGTCAGTGGATTACCGTCGCCCTGTCAGCCAAATATTACGCTGTCGGC
TGGCTAGCGCTGTGGGTATTCACACTGCTGTTCTGTAGCCTGGCGCTACGTCATCCGTTATCGGAGCTAAGACGCGTCCT
GCTGGTTCTGAGCGCGCTGGCGCTATGTTGGCTGATGCGCTGGACATTGTTGATTCAGGTACAAACCGTACCCAAGTTCA
ACGCGCAATTTAACCCTTACACGTTACCAGGCGGAACGGATGGCTGGCTGGCTATTCTCGGCACCTTCGGCCTGTGGATA
GCGCTACTGATTAGTATTCGTGAAACGCTGAACGGACTCACCAGGAGATTACAACATGGCTAA

Protein sequence :
MTHSLIIEEVLAHPQDISWLPWAVQYFFFIGIAACAALFACYLHWRKKDAATEENRALLIAITCAITAPLALTADLHQTA
RVWHFYAWPTPWSWMPWGALFLPLFTGFLALWFLAQQIKRLFNKSYNVTKWLALASALCAVGLLIYTGREVSVVLARPIW
FSYAFPVAMFLSALQAFFALMIVAARRDSVRLPKILWGQLWTLAALGLVVAMWVSGDTLSGTAIRQWITVALSAKYYAVG
WLALWVFTLLFCSLALRHPLSELRRVLLVLSALALCWLMRWTLLIQVQTVPKFNAQFNPYTLPGGTDGWLAILGTFGLWI
ALLISIRETLNGLTRRLQHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrC NP_456143.1 tetrathionate reductase subunit C (membrane protein) Virulence SPI-2 Protein 3e-134 100
ttrC NP_805055.1 tetrathionate reductase subunit C Virulence SPI-2 Protein 3e-134 100
ttrC NP_460349.1 tetrathionate reductase complex subunit C Virulence SPI-2 Protein 5e-132 99
ttrC YP_216392.1 tetrathionate reductase complex subunit C Virulence SPI-2 Protein 3e-133 99
ttrC CAB37415.1 tetrathionate reductase subunit C (TtrC) Virulence SPI-2 Protein 3e-132 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ttrC NP_456143.1 tetrathionate reductase subunit C (membrane protein) VFG0485 Protein 2e-132 99