Gene Information

Name : N559_5301 (N559_5301)
Accession : YP_008415082.1
Strain :
Genome accession: NC_022078
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional activator CusR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 212430 - 213110 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATATTAATCGTTGAAGACGAAATTAAAACAGGTGAATATCTCAGCAAGGGGCTGACAGAGGCGGGGTTCGTCGT
GGATCACGCTGATAATGGTCTGACCGGATATCATCTTGCCATGACAGCCGAGTATGATTTAGTCATCCTGGATATCATGC
TGCCTGATGTAAACGGCTGGGATATCATCCGTATGCTGCGCAGTGCCGGAAAGGGGATGCCGGTATTACTGCTGACGGCC
CTTGGCACGATTGAACACAGGGTCAAAGGACTTGAGCTGGGTGCGGACGATTATCTGGTGAAGCCCTTTGCGTTTGCTGA
ACTGCTCGCCCGGGTAAGAACCCTCCTCAGGCGGGGAAACACGATGATCACGGAAAGCCAGCTTAAAGTGGCTGACCTCT
CGGTTGATCTCGTATCCAGAAAAGTCAGCCGCGCCGGGAACCGCATTGTGCTCACCAGTAAAGAGTTCAGCTTGCTGGAA
TTCTTCATTCGCCATCAGGGAGAAGTTCTTCCCCGCTCCCTGATTGCCTCTCAGGTCTGGGACATGAATTTTGACAGCGA
CACTAACGCGATTGATGTCGCAGTAAAGCGACTCCGCGCTAAAATAGACAACGATTACGGGACAAAACTGATCCAGACAG
TGCGGGGCGTGGGCTACATGCTGGAGATCCCGGATGCATAG

Protein sequence : 
MKILIVEDEIKTGEYLSKGLTEAGFVVDHADNGLTGYHLAMTAEYDLVILDIMLPDVNGWDIIRMLRSAGKGMPVLLLTA
LGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGNTMITESQLKVADLSVDLVSRKVSRAGNRIVLTSKEFSLLE
FFIRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRAKIDNDYGTKLIQTVRGVGYMLEIPDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-55 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-55 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR BAC0347 Protein 4e-96 96
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR BAC0111 Protein 2e-94 87
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR BAC0083 Protein 9e-71 62
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR BAC0638 Protein 5e-65 62
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR BAC0197 Protein 2e-65 60
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR BAC0308 Protein 7e-62 59
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR BAC0125 Protein 5e-64 57
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR HE999704.1.gene1202. Protein 6e-37 42
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR AE000516.2.gene3505. Protein 3e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR VFG0596 Protein 8e-56 55
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR VFG1390 Protein 1e-42 43
N559_5301 YP_008415082.1 DNA-binding transcriptional activator CusR VFG1389 Protein 3e-34 41