Gene Information

Name : PputW619_1675 (PputW619_1675)
Accession : YP_001748549.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1864113 - 1864793 bp
Length : 681 bp
Strand : -
Note : TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3704 DNA-binding heavy metal response regulator

DNA sequence :
ATGAAACTGCTGATTGTCGAAGACCAGGCCCGCACCGGCCAGTACCTGAGCCAAGGCCTCAGCGAAGCCGGCTTCGCCAC
TGAGCTGGTCGCTGACGGCGAAACCGGCCAGCACCTGGCGCTGAGCGGCGATCACGACCTGCTGATCCTCGATGTGATGC
TCCCTGGTCGCGACGGTTGGCAGATCCTCCAGGCTGTGCGCCAGGCCGGCCTGGACACGCCGGTGCTGTTCCTCACTGCT
CGCGATGCGGTGGAGGACCGCGTGCGCGGCCTGGAACTAGGTGCCGACGATTACCTGGTCAAGCCTTTCGCCTTTTCCGA
ACTGCTGGCCCGGGTCCGCAGCCTGCTACGCCGCGGTGCCAGCCCCAGCCAAGAGACGCAGCTGGCCTTGGCCGACCTGC
GCCTGGACTTGTTCCGCCGCCGGGCAGAGCGCGCAGGCCAACGCATCGACCTGACCGCCAAGGAGTTCGCCCTGCTTGAA
TTGCTGCTGCGCCGCCAAGGCGAAGTATTGCCCAAATCGTTGATCGCCTCGCAAGTTTGGGACATGAATTTCGACAGCGA
CACCAACGTCATCGAGGTCGCAATCCGCCGCCTGCGCCTGAAAATCGACGACCCGCACCGCAACAAGCTGATTCACACCG
TGCGCGGCATGGGCTATGTGCTCGAGGAGCGCCACGACTGA

Protein sequence :
MKLLIVEDQARTGQYLSQGLSEAGFATELVADGETGQHLALSGDHDLLILDVMLPGRDGWQILQAVRQAGLDTPVLFLTA
RDAVEDRVRGLELGADDYLVKPFAFSELLARVRSLLRRGASPSQETQLALADLRLDLFRRRAERAGQRIDLTAKEFALLE
LLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRLKIDDPHRNKLIHTVRGMGYVLEERHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-51 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-50 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator BAC0083 Protein 2e-64 69
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator BAC0638 Protein 5e-59 69
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator BAC0197 Protein 6e-60 67
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator BAC0111 Protein 2e-63 64
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator BAC0308 Protein 7e-60 61
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator BAC0125 Protein 1e-58 60
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator BAC0347 Protein 3e-56 60
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator NC_002516.2.879194.p Protein 6e-27 42
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator BAC0487 Protein 4e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator VFG0596 Protein 2e-51 55
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator VFG1390 Protein 2e-34 44
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator VFG0473 Protein 6e-29 42
PputW619_1675 YP_001748549.1 two component heavy metal response transcriptional regulator VFG1389 Protein 1e-29 41