Gene Information

Name : RPB_1706 (RPB_1706)
Accession : YP_485325.1
Strain : Rhodopseudomonas palustris HaA2
Genome accession: NC_007778
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1941346 - 1942905 bp
Length : 1560 bp
Strand : -
Note : -

DNA sequence :
ATGGCTGATGCCGCTCCACCGAAGACCAAAGCCGATCCGGCCGCGGCATTTCAGGCCAATCTCGACCGCACCGCGCCGCT
GCTGAAGACGCTGAAAGCCGACGGCATCGGCCACCTGATCGACGGCGCGATCGTGCCATCGTCGTCCGGCGAGGTTTTCG
AGACGACCTCGCCGATCGACAATTGCGTGCTGGCGCAAGTGGCGCGCGGCACCTCTGACGACATCGACCGCGCGGCGCAG
GCAGCCAAGCGCGCGTTTCCGGCGTGGCGCGACATGGCGGCATCGGCGCGGCGCAAATTGCTGCACAAGGTGGCGGACGC
GATAGAAGCACGCGCCGACGACATCGCCGTGCTGGAATGCATCGACACCGGGCAAGCACATCGCTTCATGGCCAAGGCCG
CGATCCGCGCCGCCGAGAATTTCCGGTTCTTCGCCGACAAATGCGCCGAGGCGCGCGACGGGCTGAACACGCCGAGCGAC
GAGCACTGGAACGTTTCGACCCGGGTGCCGATCGGCCCGGTCGGCGTGATCACGCCGTGGAATACGCCGTTCATGCTGTC
GACCTGGAAGATCGCGCCGGCGCTGGCCGCCGGCTGCACCGTCGTGCACAAGCCCGCCGAGTGGTCGCCGGTGACCGCGG
ATCTGCTGTCGCGAATCTGCAAGGACGCCGGCCTGCCCGACGGCGTGCTCAACACCGTGCAGGGCTTCGGCGAAGAAGCA
GGCAAGGCGCTGACCGAACATCCGGCGATCAAGGCGATCGCCTTCGTCGGCGAGACCGCCACGGGTGCGGCGATCATGGC
GCAGGGCGCGCCGACGCTGAAGCGGGTGCATTTCGAACTCGGCGGCAAGAACCCGGTGATCGTGTTCGACGACGCCGATC
TCGACCGCGCGCTCGACGCCGTGGTGTTCATGATCTACTCGCTCAACGGCGAGCGCTGCACCTCGTCCAGCCGGCTGCTG
ATCCAGCAATCGATCGCCGACGCCTTCATCGACAAGCTCGCGGCCCGCGTCCGGGCGCTCAAGGTCGGCCATCCGCTCGA
TCCGGCCACCGAAGTCGGCCCGCTGATCCATCAGCGCCATCTCGACAAGGTGTGCTCCTATTTCGACATTGCGAAGAACG
AAGGTGCGACCGTCGCCGTCGGTGGCGCGCGCCACGATGGCCCCGGCGGCGGCAACTACGTTCAGCCAACGCTGGTGACC
GGCGCGCGCAGTAACATGCGGGTCGCGCAAGACGAAGTGTTCGGCCCGTTTCTCACGGTGATCCCGTTCAAGGACGAGGC
CGACGCGATCGCGATCGCCAACGACATCCGCTACGGCCTCACCGGCTATATCTGGACCGGCGATATGGGCCGCGCGCTGC
GCGTCGCCGACGCGCTCGAGGCCGGCATGATCTGGCTGAACTCCGAAAACGTTCGGCATCTGCCGACCCCGTTCGGCGGC
ATGAAGCAATCCGGCATCGGCCGCGACGGCGGCGACTATTCGTTCGAGTTCTACATGGAAACCAAGCACGTCTCGCTGGC
CCGCGGCACGCACAAGATTCAGAGACTGGGGGTTATGTAG

Protein sequence :
MADAAPPKTKADPAAAFQANLDRTAPLLKTLKADGIGHLIDGAIVPSSSGEVFETTSPIDNCVLAQVARGTSDDIDRAAQ
AAKRAFPAWRDMAASARRKLLHKVADAIEARADDIAVLECIDTGQAHRFMAKAAIRAAENFRFFADKCAEARDGLNTPSD
EHWNVSTRVPIGPVGVITPWNTPFMLSTWKIAPALAAGCTVVHKPAEWSPVTADLLSRICKDAGLPDGVLNTVQGFGEEA
GKALTEHPAIKAIAFVGETATGAAIMAQGAPTLKRVHFELGGKNPVIVFDDADLDRALDAVVFMIYSLNGERCTSSSRLL
IQQSIADAFIDKLAARVRALKVGHPLDPATEVGPLIHQRHLDKVCSYFDIAKNEGATVAVGGARHDGPGGGNYVQPTLVT
GARSNMRVAQDEVFGPFLTVIPFKDEADAIAIANDIRYGLTGYIWTGDMGRALRVADALEAGMIWLNSENVRHLPTPFGG
MKQSGIGRDGGDYSFEFYMETKHVSLARGTHKIQRLGVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-78 46