Gene Information

Name : PputGB1_1699 (PputGB1_1699)
Accession : YP_001667938.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1926415 - 1927095 bp
Length : 681 bp
Strand : -
Note : TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3704 DNA-binding heavy metal response regulator

DNA sequence :

ATGAAACTGCTGATCGTCGAAGACCAGGCCCGCACCGGCCAGTACCTGAGCCAGGGCCTGAGCGAGGCCGGCTTTGCCAC
CGAGTTGGCCACCGATGGCGAGACCGGGCAGTTCCTCGCCCTGACCGGCGACCACGACCTGCTGATCCTCGACGTGATGC
TGCCCGGGCGCGACGGCTGGCAAATCCTTCAGGCCGTGCGCCAGGCTGGCCTGGATACACCCGTGCTGTTCCTGACCGCC
CGCGACGCCGTCGAGGACCGCGTGCATGGCTTGGAGCTGGGCGCCGATGATTACCTGGTCAAGCCGTTCGCCTTTTCCGA
ACTGCTGGCCCGGGTACGCAGCCTGCTGCGCCGGGGCGCCAGCCCAAGCCAGGACACCACCCTGAGCCTGGCCGACCTGC
GCCTGGACCTGATCCGCCGCCGCGCCGAACGCGCAGGCACCCGTATCGACCTGACCGCCAAGGAGTTCTGCCTGCTCGAA
CTGCTACTGCGCCGCCAGGGTGAGGTGTTGCCAAAATCGCTGATCGCCTCGCAGGTGTGGGACATGAACTTCGACAGCGA
TACCAATGTGATCGAAGTGGCAATCCGCCGCCTGCGCCTGAAAATCGACGACCCGCACCCCAACAAGCTGATCCACACGG
TGCGCGGCATGGGCTACGTACTCGAAGAACGCACTGAATGA

Protein sequence :

MKLLIVEDQARTGQYLSQGLSEAGFATELATDGETGQFLALTGDHDLLILDVMLPGRDGWQILQAVRQAGLDTPVLFLTA
RDAVEDRVHGLELGADDYLVKPFAFSELLARVRSLLRRGASPSQDTTLSLADLRLDLIRRRAERAGTRIDLTAKEFCLLE
LLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRLKIDDPHPNKLIHTVRGMGYVLEERTE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
copR	NP_460069.2	transcriptional regulatory protein YedW	Not tested	SPI-5	Protein	1e-48	54
copR	AAC33719.1	regulatory protein CopR	Not tested	SPI-5	Protein	1e-47	53

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PputGB1_1699	YP_001667938.1	two component heavy metal response transcriptional regulator	BAC0638	Protein	6e-57	69
PputGB1_1699	YP_001667938.1	two component heavy metal response transcriptional regulator	BAC0083	Protein	2e-62	68
PputGB1_1699	YP_001667938.1	two component heavy metal response transcriptional regulator	BAC0197	Protein	2e-58	65
PputGB1_1699	YP_001667938.1	two component heavy metal response transcriptional regulator	BAC0111	Protein	6e-62	64
PputGB1_1699	YP_001667938.1	two component heavy metal response transcriptional regulator	BAC0308	Protein	9e-59	62
PputGB1_1699	YP_001667938.1	two component heavy metal response transcriptional regulator	BAC0125	Protein	3e-57	60
PputGB1_1699	YP_001667938.1	two component heavy metal response transcriptional regulator	BAC0347	Protein	9e-55	59
PputGB1_1699	YP_001667938.1	two component heavy metal response transcriptional regulator	NC_002516.2.879194.p	Protein	4e-27	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PputGB1_1699	YP_001667938.1	two component heavy metal response transcriptional regulator	VFG0596	Protein	4e-49	54
PputGB1_1699	YP_001667938.1	two component heavy metal response transcriptional regulator	VFG1390	Protein	1e-33	44
PputGB1_1699	YP_001667938.1	two component heavy metal response transcriptional regulator	VFG1389	Protein	3e-29	43