Gene Information

Name : PPS_1726 (PPS_1726)
Accession : YP_004701177.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1937160 - 1937840 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
ATGAAACTGCTGATCGTCGAAGACCAGGCCCGTACCGGCCAGTACCTGAGCCAGGGTCTGAACGAGGCCGGCTTCGCCAC
CGAACTGGCCACCGACGGCGAGACCGGCCAGTTCCTCGCCCTGACCGGTGACCACGACCTGCTGATTCTCGACGTGATGC
TGCCCGGCCGTGACGGCTGGCAGATCCTCCAGGCCGTGCGCCAGGCCGGCCTGGACACCCCGGTGCTGTTTCTCACCGCC
CGCGATGCCGTGGAGGACCGGGTACACGGCCTGGAGCTGGGCGCCGATGATTACCTGGTCAAGCCGTTCGCCTTCTCCGA
ACTGCTGGCGCGGGTGCGCAGCCTGCTACGCCGGGGCACCAGCCCCAGCCAGGACACCACCCTGGGCCTGGCCGACCTGC
GCCTGGACCTGATCCGCCGCCGCGCCGAGCGCGCCGGCCAGCGCATCGACCTGACCGCCAAGGAGTTCGCCCTGCTTGAA
CTGCTGCTGCGCCGCCAGGGCGAGGTGCTGCCCAAATCGCTGATCGCCTCGCAGGTGTGGGACATGAATTTCGACAGCGA
CACCAATGTGATCGAAGTGGCGATCCGCCGCCTGCGCCTGAAGATCGACGACCCACACCCCAACAAACTGATCCATACCG
TACGCGGCATGGGCTATGTACTCGAAGAGCGCGGGGAGTGA

Protein sequence :
MKLLIVEDQARTGQYLSQGLNEAGFATELATDGETGQFLALTGDHDLLILDVMLPGRDGWQILQAVRQAGLDTPVLFLTA
RDAVEDRVHGLELGADDYLVKPFAFSELLARVRSLLRRGTSPSQDTTLGLADLRLDLIRRRAERAGQRIDLTAKEFALLE
LLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRLKIDDPHPNKLIHTVRGMGYVLEERGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-49 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-48 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator BAC0638 Protein 3e-57 70
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator BAC0083 Protein 3e-63 69
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator BAC0197 Protein 8e-59 66
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator BAC0111 Protein 2e-61 63
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator BAC0308 Protein 3e-59 62
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator BAC0125 Protein 2e-57 60
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator BAC0347 Protein 1e-54 59
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator NC_002516.2.879194.p Protein 8e-28 42
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator HE999704.1.gene1528. Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator VFG0596 Protein 5e-50 55
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator VFG1390 Protein 3e-34 44
PPS_1726 YP_004701177.1 two component heavy metal response transcriptional regulator VFG1389 Protein 7e-30 43