Gene Information

Name : SU5_01724 (SU5_01724)
Accession : YP_006087360.1
Strain : Salmonella enterica B182
Genome accession: NC_017623
Putative virulence/resistance : Virulence
Product : Inositol phosphate phosphatase sopB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1914106 - 1915659 bp
Length : 1554 bp
Strand : -
Note : -

DNA sequence :
ATGCAGATTCTCTCAGGCCAGGGCAAAGCGCCGGCTAAAGCGCCCGACGCTCGCCCGGAAATTATTGTCCTGCGAGAACC
CGGCGCGACATGGGGGAATTATCTACAGCATCAGAAGACGTCTAACCACTCGCTGCATAACCTCTATAACTTACAGCGCG
ATCTTCTTACCGTCGCGGCAACCGTTCTGGGTAAACAAGACCCGGTTCTAACGTCAATGGCAAACCAAATGGAGTTAGCC
AAAGTTAAAGCGGACCGGCCAGCAACAAAACAAGAAGAAGCCGCGGCAAAAGCATTGAAGAAAAATCTTATCGAACTTAT
TGCAGCACGCACTCAGCAGCAGGATGGCTTACCTGCAAAAGAAGCTCATCGCTTTGCGGCAGTAGCGTTTAGAGACGCTC
AGGTCAAGCAGCTTAATAACCAGCCCTGGCAAACCATAAAAAATACACTCACGCATAACGGGCATCACTATACCAACACG
CAGCTCCCTGCAGCAGAGATGAAAATCGGCGCAAAAGATATCTTTCCCAGTGCTTATGAGGGAAAGGGCGTATGCAGTTG
GGATACCAAGAATATTCATCACGCCAATAATTTGTGGATGTCCACGGTGAGTGTGCATGAGGACGGTAAAGATAAAACGC
TTTTTTGCGGGATACGTCATGGCGTGCTTTCCCCCTATCATGAAAAAGATCCGCTTCTGCGTCACGTCGGCGCTGAAAAC
AAAGCCAAAGAAGTATTAACTGCGGCACTTTTTAGTAAACCTGAGTTGCTTAACAAAGCCTTAGCGGGCGAGGCGGTAAG
CCTGAAACTGGTATCCGTCGGGTTACTCACCGCGTCGAATATTTTCGGCAAAGAGGGAACGATGGTCGAGGACCAAATGC
GCGCATGGCAATCGTTGACCCAGCCGGGAAAAATGATTCATTTAAAAATCCGCAATAAAGATGGCGATCTACAGACGGTA
AAAATAAAACCGGACGTCGCCGCATTTAATGTGGGTGTTAATGAGCTGGCGCTCAAGCTCGGCTTTGGCCTTAAGGCATC
GGATAGCTATAATGCCGAGGCGCTACATCAGTTATTAGGCAATGATTTACGCCCTGAAGCCAGACCAGGTGGCTGGGTTG
GCGAATGGCTGGCGCAATACCCGGATAATTATGAGGTCGTCAATACATTAGCGCGCCAGATTAAGGATATATGGAAAAAT
AACCAACATCATAAAGATGGCGGCGAACCCTATAAACTCGCACAACGCCTTGCCATGTTAGCCCATGAAATTGACGCGGT
ACCCGCCTGGAATTGTAAAAGCGGCAAAGATCGTACAGGGATGATGGATTCAGAAATCAAGCGAGAGATCATTTCCTTAC
ATCAGACCCATATGTTAAGTGCGCCTGGTAGTCTTCCGGATAGCGGTGGACAGAAAATTTTCCAAAAAGTATTACTGAAT
AGCGGTAACCTGGAGATTCAGAAACAAAATACGGGCGGGGCGGGAAACAAAGTAATGAAAAATTTATCGCCAGAGGTGCT
CAATCTTTCCTATCAAAAAACGAGTTGGGGATGA

Protein sequence :
MQILSGQGKAPAKAPDARPEIIVLREPGATWGNYLQHQKTSNHSLHNLYNLQRDLLTVAATVLGKQDPVLTSMANQMELA
KVKADRPATKQEEAAAKALKKNLIELIAARTQQQDGLPAKEAHRFAAVAFRDAQVKQLNNQPWQTIKNTLTHNGHHYTNT
QLPAAEMKIGAKDIFPSAYEGKGVCSWDTKNIHHANNLWMSTVSVHEDGKDKTLFCGIRHGVLSPYHEKDPLLRHVGAEN
KAKEVLTAALFSKPELLNKALAGEAVSLKLVSVGLLTASNIFGKEGTMVEDQMRAWQSLTQPGKMIHLKIRNKDGDLQTV
KIKPDVAAFNVGVNELALKLGFGLKASDSYNAEALHQLLGNDLRPEARPGGWVGEWLAQYPDNYEVVNTLARQIKDIWKN
NQHHKDGGEPYKLAQRLAMLAHEIDAVPAWNCKSGKDRTGMMDSEIKREIISLHQTHMLSAPGSLPDSGGQKIFQKVLLN
SGNLEIQKQNTGGAGNKVMKNLSPEVLNLSYQKTSWG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sigD NP_455588.1 cell invasion protein Virulence SPI-5 Protein 0.0 99
sopB YP_216030.1 outer protein Virulence SPI-5 Protein 0.0 99
sopB NP_460064.1 secreted effector protein Virulence SPI-5 Protein 0.0 99
sopB AAC33723.1 SopB Virulence SPI-5 Protein 0.0 98
sopB AAK27355.1 SopB Virulence SPI-5 Protein 2e-175 91
sopB AAK27356.1 SopB Virulence SPI-5 Protein 6e-165 86
sopB AAK27357.1 SopB Virulence SPI-5 Protein 1e-151 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_01724 YP_006087360.1 Inositol phosphate phosphatase sopB VFG0465 Protein 0.0 99