Gene Information

Name : czcR1 (mma_1761)
Accession : YP_001353451.1
Strain : Janthinobacterium sp. Marseille
Genome accession: NC_009659
Putative virulence/resistance : Virulence
Product : heavy metal response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1991408 - 1992106 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATTTTATTTGTAGAAGACGAAATAAAGCCAGGTGAAACCATGCACCATGGTTTGAAGGATGCAGGGTTTATTGT
TGATTGCGTAAAAGCGGGAAGTAATGGTCTGACAAGAGCACTTCGTGGAGCATATGATCTGATCGTTTTAGACGTAAAGA
AACCTCATCTCAACGGTTGGAAATTACTGTTGGAGCTGAGAGCGGCTCATGATGCCCCCTTGCTTTTTCTCACTGCACGT
GAGGCGATGGATAATCAAGTAAGTGACGCAAAGCTTGGTGTTGATGATTATATGATTAAGTCATTTTCGTTCATGGAACT
CATGGAGCGTGTAAGAATTTTATTGCGAAGAGAATGTGAGCAGGAGCCAAAGATAATCGAGATTTCCGACATACTGATTG
ATGTTTCTAAACGTTGTGTGTTGCGAAATGGGCGGTATATAGATCTGACCAGAAAACAATTTTCATTGCTCCATCTTTTG
GCGAAGCGCTCCGGAGAAGCTCTTTCTCGATCACTCATTGCCGCGCAAGTGTGGGGTGCTGATTTTGATGGTGATACAAA
CGTCGTTGATTTTGATGGTGATACAAACGTCGTTGATGTTGCAGTGTGTCGTCTAAGGGCGAAGTTGGATGACCATTATC
CTCAGCAATTGATCCGAACAGTCCGAGGTATGGGATATGTACTAGAGGACAAAAAATGA

Protein sequence : 
MKILFVEDEIKPGETMHHGLKDAGFIVDCVKAGSNGLTRALRGAYDLIVLDVKKPHLNGWKLLLELRAAHDAPLLFLTAR
EAMDNQVSDAKLGVDDYMIKSFSFMELMERVRILLRRECEQEPKIIEISDILIDVSKRCVLRNGRYIDLTRKQFSLLHLL
AKRSGEALSRSLIAAQVWGADFDGDTNVVDFDGDTNVVDVAVCRLRAKLDDHYPQQLIRTVRGMGYVLEDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-47 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-46 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
czcR1 YP_001353451.1 heavy metal response regulator BAC0197 Protein 4e-51 49
czcR1 YP_001353451.1 heavy metal response regulator BAC0083 Protein 4e-51 48
czcR1 YP_001353451.1 heavy metal response regulator BAC0308 Protein 4e-51 48
czcR1 YP_001353451.1 heavy metal response regulator BAC0125 Protein 3e-50 47
czcR1 YP_001353451.1 heavy metal response regulator BAC0638 Protein 3e-44 47
czcR1 YP_001353451.1 heavy metal response regulator BAC0111 Protein 2e-46 46
czcR1 YP_001353451.1 heavy metal response regulator BAC0347 Protein 2e-42 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
czcR1 YP_001353451.1 heavy metal response regulator VFG0596 Protein 2e-47 46