Gene Information

Name : CSSP291_21158 (CSSP291_21158)
Accession : YP_007442925.1
Strain :
Genome accession: NC_020261
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional activator CusR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 17240 - 17920 bp
Length : 681 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAAATATTGATCGTCGAAGACGAAATTAAAACAGGTGAATATCTCAGCAAAGGGCTTACAGAAGCAGGGTTCGTAGT
GGATCACGCTGATAATGGTCTTACCGGATATCATCTCGCCATGACCGCCGAGTATGATTTAGTCATTCTGGATATCATGC
TACCTGATGTGAACGGCTGGGATATCATCCGTATGCTGCGCACTGCCGGAAAGGGTATGCCGGTCTTACTGCTGACGGCC
CTGGGCACGATCGAACACAGGGTCAAAGGACTGGAGCTGGGTGCGGACGATTATCTGGTTAAACCCTTTGCGTTTGCCGA
ACTGCTCGCCCGGGTGAGAACTCTTCTGAGGCGGGGAAACACGATGATCACGGAAAGCCAGTTTAAGGTGGCTGACCTCT
CTATTGATCTCGTATCCAGAAAAGTTAGCCGCGCCGGGAACCGCATTGTGCTCACCAGTAAAGAGTTCAGCCTGCTGGAA
TTCTTCATTCGCCATCAGGGAGAAGTTCTTCCCCGCTCCCTGATTGCCTCTCAGGTCTGGGACATGAATTTTGACAGCGA
CACTAACGCGATTGATGTCGCAGTAAAGCGACTCCGCGCTAAAATAGACAACGATTACGAGACAAAACTGATCCAGACAG
TGCGGGGCGTGGGCTACATGCTGGAGATCCCGGATGCATAG

Protein sequence : 
MKILIVEDEIKTGEYLSKGLTEAGFVVDHADNGLTGYHLAMTAEYDLVILDIMLPDVNGWDIIRMLRTAGKGMPVLLLTA
LGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGNTMITESQFKVADLSIDLVSRKVSRAGNRIVLTSKEFSLLE
FFIRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRAKIDNDYETKLIQTVRGVGYMLEIPDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-55 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-55 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_21158 YP_007442925.1 DNA-binding transcriptional activator CusR BAC0347 Protein 9e-95 94
CSSP291_21158 YP_007442925.1 DNA-binding transcriptional activator CusR BAC0111 Protein 1e-95 87
CSSP291_21158 YP_007442925.1 DNA-binding transcriptional activator CusR BAC0083 Protein 7e-71 62
CSSP291_21158 YP_007442925.1 DNA-binding transcriptional activator CusR BAC0638 Protein 5e-65 62
CSSP291_21158 YP_007442925.1 DNA-binding transcriptional activator CusR BAC0197 Protein 2e-65 60
CSSP291_21158 YP_007442925.1 DNA-binding transcriptional activator CusR BAC0308 Protein 2e-62 59
CSSP291_21158 YP_007442925.1 DNA-binding transcriptional activator CusR BAC0125 Protein 8e-64 56
CSSP291_21158 YP_007442925.1 DNA-binding transcriptional activator CusR HE999704.1.gene1202. Protein 3e-36 41
CSSP291_21158 YP_007442925.1 DNA-binding transcriptional activator CusR AE000516.2.gene3505. Protein 3e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_21158 YP_007442925.1 DNA-binding transcriptional activator CusR VFG0596 Protein 6e-56 55
CSSP291_21158 YP_007442925.1 DNA-binding transcriptional activator CusR VFG1390 Protein 1e-42 43