Gene Information

Name : H681_09010 (H681_09010)
Accession : YP_007657216.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1969221 - 1970681 bp
Length : 1461 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGATCAAGCACTGGATCAACGGCCGCGAGGTCGAGAGCAAAGAAGTCTTCGAAACCATCAACCCGGCCACCACCGAAGT
GATCGCCGAAGTCGCCAGCGGCGGCGCGCAAGAGATCGCCATGGCGGTCGCCGCGGCCAAGGAAGCCTTCCCGAAATGGG
CCGCCACCCCCGCCAGGGAACGCGCGAAGCTGATGCGGAGGCTCGGTGAGCTGATCGACCAGAACGTGCCGAACCTGGCC
GAGCTGGAGACCCTGGACACCGGTCTGCCGATCCACCAGACCCGCAACGTGCTGATCCCGCGCGCCTCGCACAACTTCGA
GTTCTTCGCCGAAGTCTGCACCCGCATGGATGGCCACAGCTACCCGGTCGACGACCAGATGCTCAACTACACCCTGTACC
AGCCGGTTGGCGTGTGCGGCCTGGTGTCGCCGTGGAACGTGCCGTTCATGACCGCCACCTGGAAGACTGCACCGTGCCTC
GCGCTGGGCAACACGGCAGTGCTGAAGATGTCCGAGCTGTCGCCACTGACCGCCAACAAACTGGGACGCCTGGCGCTGGA
AGCCGGCATCCCGGCCGGAGTGCTGAACGTGGTGCAGGGCTACGGCGCCACCGCTGGCGACGCCCTCGTCCGCCACCCGG
ACGTGCGCGCGATCTCCTTCACCGGCGGCACCGCCACCGGCCGCAGGATCATGCAGACCGCCGGCCTGAAGAAATACTCC
ATGGAACTGGGCGGCAAGTCGCCGGTGCTGATCTTCGATGACGCCGACCTCGACCGCGCCCTCGACGCCGCGCTGTTCAC
CATCTTCTCGCTGAACGGCGAACGCTGCACCGCCGGCAGCCGGATCTTCATCCAGGAGAGCGTGTACGACACATTCGTCG
CCAAGTTCGCCGCCCGCGCCAAGCGCCTGATCGTCGGCGACCCGCAGGACCCGAAAACCCAGGTCGGCTCGATGATCACC
CAGGCCCACTACGACAAGGTCACCGGCTACATCCGCATCGGCATCGAGGAAGGCGCGACCCTTCTCGCCGGCGGCCTGGA
ACGTCCGGCCAACCTGCCGGCGCACCTCGCCAAGGGGCAGTTCATCCAGCCCACCGTGTTCGCCAACGTGGACAACCGTA
TGCGTATCGCCCAGGAGGAAATCTTCGGCCCGGTGGTGTGCCTGATGAAATTCAAGGACGAGGCCGAAGCGCTGCGTCTG
GCCAACGATACCGAATACGGCCTGGCCTCCTACATCTGGACCCAGGACATCGGCAAGGCCCACCGCCTGGCCCGCGGCAT
CGAGGCCGGCATGGTGTTCATCAACAGCCAGAACGTCCGCGACCTGCGCCAGCCATTCGGCGGCGTGAAGGGTTCGGGCA
CCGGCCGCGAAGGTGGCGAGTACAGCTTCGAGGTGTTCGCCGAAGTCAAGAACGTGTGCATTTCCATGGGCAGCCATCAC
ATCCCCCGCTGGGGCGTGTGA

Protein sequence :
MIKHWINGREVESKEVFETINPATTEVIAEVASGGAQEIAMAVAAAKEAFPKWAATPARERAKLMRRLGELIDQNVPNLA
ELETLDTGLPIHQTRNVLIPRASHNFEFFAEVCTRMDGHSYPVDDQMLNYTLYQPVGVCGLVSPWNVPFMTATWKTAPCL
ALGNTAVLKMSELSPLTANKLGRLALEAGIPAGVLNVVQGYGATAGDALVRHPDVRAISFTGGTATGRRIMQTAGLKKYS
MELGGKSPVLIFDDADLDRALDAALFTIFSLNGERCTAGSRIFIQESVYDTFVAKFAARAKRLIVGDPQDPKTQVGSMIT
QAHYDKVTGYIRIGIEEGATLLAGGLERPANLPAHLAKGQFIQPTVFANVDNRMRIAQEEIFGPVVCLMKFKDEAEALRL
ANDTEYGLASYIWTQDIGKAHRLARGIEAGMVFINSQNVRDLRQPFGGVKGSGTGREGGEYSFEVFAEVKNVCISMGSHH
IPRWGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 0.0 80
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-63 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 9e-68 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_09010 YP_007657216.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase VFG0082 Protein 2e-67 41