Gene Information

Name : CDCO157_1797 (CDCO157_1797)
Accession : YP_006312664.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Virulence
Product : gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1872490 - 1873977 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGAATTTTCATCATCTGGCTTACTGGCAGGATAAAGCGTTAAGTCTCGCCATTGAAAACCGCTTATTTATTAACGGTGA
ATATACTGCTGCGGCGGAAAATGAAACCTTTGAAACCGTTGATCCGGTTACCCAGGCACCGCTGGCGAATATTGCGCGCG
GCAAGAGCGTCGATATCGACCGTGCGGTGAGCGCAGCACGCGGCGTATTTGAACGCGGCGACTGGTCACTCTCTTCTCCG
GCAAAACGTAAAGCGGTGCTGAATAAACTCGCCGATTTAATAGAAGCCAACGCCGAAGAGCTGGCACTGCTGGAAACTCT
CGACACCGGCAAACCGATTCGTCACAGTCTGCGTGATGATATACCCGGCGCGGCGCGCGCCATTCGCTGGTACGCCGAAG
CGATCGACAAAGTGTATGGCGAAGTGGCGACCACCAGTAGCCATGAGCTGGCGATGATCGTGCGTGAACCGGTCGGCGTG
ATTGCCGCCATCGTGCCGTGGAACTTCCCGCTGCTGCTGACTTGCTGGAAGCTTGGCCCGGCGCTGGCAGCAGGGAACAG
CGTTGTCCTGAAACCGTCTGAAAAATCACCGCTCAGTGCGATTCGTCTCGCGGGGCTGGCGAAAGAAGCAGGCTTGCCGG
ATGGTGTGTTGAACGTGGTGACGGGTTTTGGTCATGAAGCGGGGCAGGCGCTGTCGCGTCATAACGATATCGACGCCATT
GCCTTTACCGGTTCGACCCGTACCGGGAAACAGCTGCTGAAAGATGCAGGCGACAGCAACATGAAACGCGTCTGGCTGGA
AGCGGGCGGCAAAAGCGCCAACATCGTTTTCGCTGACTGCCCGGATTTGCAACAGGCGGCAAGCGCCACCGCAGCAGGCA
TCTTCTACAACCAGGGGCAGGTGTGCATCGCCGGAACGCGCCTGTTGCTGGAAGAGAGCATAGCCGATGAATTCTTAGCC
CTGTTAAAACAGCAGGCGCAAAACTGGCAGCCGGGCCATCCACTTGATCCCGCAACCACCATGGGCACCTTAATCGACTG
CGCCCACGCCGACTCGGTCCATAGCTTTATTCAGGAAGGCGAAAGCAAAGGGCAACTGTTGTTGGATGGCCGTAACGCCG
GGCTGGCTGTCGCCATCGGCCCGACCATCATTGTGGATGTAGACCCGAATGCGTCCTTAAGCCGCGAAGAGATTTTCGGT
CCGGTGCTGGTGGTCACGCGTTTCACATCAGAAGAACAGGCGCTACAGCTTGCCAACGACAGCCAGTACGGCCTTGGCGC
GGCGGTATGGACGCGCGACCTCTCCCGCGCGCACCGCATGAGCCGACGCCTGAAAGCCGGTTCCGTCTTCGTCAATAACT
ACAACGACGGCGATATGACCGTGCCGTTTGGCGGCTATAAGCAGAGCGGCAACGGTCGCGACAAATCCCTGCATGCCCTT
GAAAAATTCACCGAACTGAAAACCATCTGGATAAGCCTGGAGGCCTGA

Protein sequence :
MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVTQAPLANIARGKSVDIDRAVSAARGVFERGDWSLSSP
AKRKAVLNKLADLIEANAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV
IAAIVPWNFPLLLTCWKLGPALAAGNSVVLKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAI
AFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLA
LLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIQEGESKGQLLLDGRNAGLAVAIGPTIIVDVDPNASLSREEIFG
PVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHAL
EKFTELKTIWISLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 8e-107 52
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-69 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDCO157_1797 YP_006312664.1 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase VFG0082 Protein 4e-69 41