Gene Information

Name : hpcC (Rta_01800)
Accession : YP_004617263.1
Strain : Ramlibacter tataouinensis TTB310
Genome accession: NC_015677
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 184339 - 185796 bp
Length : 1458 bp
Strand : -
Note : -

DNA sequence :
ATGAAGATCGACCACCTGATCGGCGGCAAGGCGCAGGCCGGCCGCGACTACTTCCCCACCGTGAACCCGGCCACGCAGGA
GGTGCTGGCCGAGGTGGCGTCGGGCGGCGAGGCCGAGGTGCAGGCCGCCGTCGCGGCCGCCAAGGCCGCCTTCCCTGCCT
GGGCGGGAATGCCCGCGCCGCAGCGCGCCAGGCTGATCCGCAGGCTGGGCGACTTGGTCGCCGCCCACGTGCCCGCGATC
GCCCGCACCGAGACCGACGACACCGGCCAGGTGATCGCCCAGACCGGCAAGCAGCTGGTGCCGCGCGCGGCCGACAACTT
CCACTACTTCGCCGAGATGTGCACGCGGGTGGACGGCCACACCTACCCGACCGAGACGCACCTCAACTACACGCTGTTCC
ACCCGGTGGGCGTGTGCGCGCTGATCTCGCCCTGGAACGTGCCTTTCATGACGGCCACCTGGAAGGTCGCGCCCTGCCTG
GCCTTCGGCAACACGGCGGTGCTGAAGATGAGCGAGCTGTCGCCGCTGACCGCCGCGCGCCTGGGCGAGCTGGCGCTGGA
GGCCGGCATCCCGCCGGGCGTGCTCAACATCGTGCACGGCTGGGGCAGGGAGGCGGGCGAGCCGCTGGTGCGGCACCCGG
ACGTGCGCGCCATCTCCTTCACCGGCTCCACGGCCACCGGCAACCGCATCGTCCAGCAGGCGGGCCTGAAGAAGTTCAGC
ATGGAGCTGGGCGGCAAGTCGCCCTTCGTCGTTTTCGACGACGCCGACCTGGCGCGCGCGCTGGATGCCGCCGTCTTCAT
GATCTTCTCCAACAACGGCGAGCGCTGCACGGCCGGCAGCCGCATCCTGGTGCAGCAGTCCATCTACGCCGACTTCGTGC
AGAAGTTCGTGGAGCGGGCCGGGCGCATCACCGTGGGCGACCCGCTGGACGAGAAGACCATCATCGGTCCCATGATCTCG
CAGGCCCACCTGGCCAAGGTGCGCAGCTACATCGAGCTGGGGCCGAAGGAAGGCGCCATGCTGCTGTGCGGCGGGCTCGA
TGCGCCGCTGCTGCCCGACCGGGTGAAGAAGGGCAACTACGTCATGCCCACCGTGTTCGCCGACGTGGACAACCGCATGA
GGATCGCCCAGGACGAGATCTTCGGCCCGGTGGCCTGCCTGATCCCGTTCCGGGACGAGCCCGACGCCATCCGCATCGCC
AACGACATCGCCTACGGCCTGTCCAGCTACGTCTGGACCGAGAACATCGGCCGCGCGCACCGGGTGGCCGCCGCCGTCGA
GGCCGGCATGTGCTTCGTCAACAGCCAGAACGTAAGAGACTTGCGCCAGCCTTTCGGCGGCACCAAGGCCTCGGGCACGG
GACGCGAGGGCGGCACCTGGAGCTACGAGGTGTTCCTGGAGCCGAAGAACGTGGCGGTGTCGCTGGGGTCGCACCACATT
CCGCGGTGGGGGGTCTGA

Protein sequence :
MKIDHLIGGKAQAGRDYFPTVNPATQEVLAEVASGGEAEVQAAVAAAKAAFPAWAGMPAPQRARLIRRLGDLVAAHVPAI
ARTETDDTGQVIAQTGKQLVPRAADNFHYFAEMCTRVDGHTYPTETHLNYTLFHPVGVCALISPWNVPFMTATWKVAPCL
AFGNTAVLKMSELSPLTAARLGELALEAGIPPGVLNIVHGWGREAGEPLVRHPDVRAISFTGSTATGNRIVQQAGLKKFS
MELGGKSPFVVFDDADLARALDAAVFMIFSNNGERCTAGSRILVQQSIYADFVQKFVERAGRITVGDPLDEKTIIGPMIS
QAHLAKVRSYIELGPKEGAMLLCGGLDAPLLPDRVKKGNYVMPTVFADVDNRMRIAQDEIFGPVACLIPFRDEPDAIRIA
NDIAYGLSSYVWTENIGRAHRVAAAVEAGMCFVNSQNVRDLRQPFGGTKASGTGREGGTWSYEVFLEPKNVAVSLGSHHI
PRWGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-133 66
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-52 42