Name : PSEBR_a1770 (PSEBR_a1770) Accession : YP_004352985.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Virulence Product : OmpR family response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2171252 - 2171932 bp Length : 681 bp Strand : - Note : - DNA sequence : ATGAAACTGCTGATCGTCGAAGACCAAACCAAAACCGGCCAATACCTGCGCCAGGGCCTGGGCGAAGCCGGGTTCAACGC CGATCTGGTGGCCGATGGCATCACCGGCCAGCAACTGGTCTTGAGCGGTGAATACGCCTTGCTGATCCTCGACGTGATGT TGCCCGGCCGCGATGGTTGGCAGATCCTGCAAGCCGTCCGTGGCGCCGGGCTGGATACACCGGTGCTGTTTCTCACCGCG CGGGATGCGGTACAGGATCGGGTACACGGCCTGGAGCTGGGCGCCGATGATTACCTGGTCAAGCCCTTTGCTTTTTCCGA GTTGCTGGCACGGGTGCGCAGCCTGTTGCGTCGAGGCAGTTCGACACAGCAGGAAACCAGCCTGCAACTGGCCGACTTGC GCCTGGACCTGATCCGCCGTCGCGTCGAACGCAGCGGTCGGCGCATCGACCTCACCGCCAAGGAATTCGCCTTGCTGGAA ATGCTTCTGCGCCGCCAGGGCGAAGTGCTGCCCAAATCGCTGATCGCGTCCCAGGTCTGGGACATGAATTTCGACAGCGA CACCAACGTCATCGAAGTCGCGATACGACGCCTGCGAATCAAGATTGACGATGACTTCCCCAGCAAACTGATCCATACCG TGCGGGGCATGGGCTATGTGCTTGAAGAGCGCAGCCTGTGA Protein sequence : MKLLIVEDQTKTGQYLRQGLGEAGFNADLVADGITGQQLVLSGEYALLILDVMLPGRDGWQILQAVRGAGLDTPVLFLTA RDAVQDRVHGLELGADDYLVKPFAFSELLARVRSLLRRGSSTQQETSLQLADLRLDLIRRRVERSGRRIDLTAKEFALLE MLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRIKIDDDFPSKLIHTVRGMGYVLEERSL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 4e-50 | 55 |
copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 2e-49 | 54 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | BAC0083 | Protein | 2e-65 | 72 |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | BAC0638 | Protein | 2e-59 | 71 |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | BAC0197 | Protein | 5e-61 | 67 |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | BAC0308 | Protein | 6e-61 | 64 |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | BAC0111 | Protein | 9e-63 | 64 |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | BAC0347 | Protein | 3e-55 | 59 |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | BAC0125 | Protein | 5e-57 | 58 |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | NC_002516.2.879194.p | Protein | 1e-25 | 41 |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | BAC0487 | Protein | 8e-27 | 41 |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | HE999704.1.gene1528. | Protein | 1e-24 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | VFG0596 | Protein | 1e-50 | 55 |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | VFG1390 | Protein | 2e-36 | 46 |
PSEBR_a1770 | YP_004352985.1 | OmpR family response regulator | VFG0473 | Protein | 4e-28 | 41 |