Gene Information

Name : SeD_A1930 (SeD_A1930)
Accession : YP_002215719.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Virulence
Product : secretion system apparatus protein SsaM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1864377 - 1864745 bp
Length : 369 bp
Strand : -
Note : -

DNA sequence :
ATGGATTGGGATCTCATTACTGAACGTAATATTCAGCTTTTTATTCAATTAGCAGGATTAGCTGAACGGCCTTTAGCGAC
CAATATGTTCTGGCGGCAAGGACAATATGAAACCTATCTAAACTATCATAACGGTCGTATTCACTTATGTCAGATACTCA
AGCAAACCTTCTTAGACGAAGAACTGCTTTTTAAAGCGTTGGCTAACTGGAAACCCGCAGCGTTCCAGGGTATTCCTCAA
CGATTATTTTTGTTGCGCGATGGGCTTGCAATGAGTTTTTCTCCACCTCTTTCCAGCTCCGCCGAGCTCTGGTTACGATT
ACATCATCGACAAATAAAATTTCTGGAGTCGCAATGCGTTCATGGTTAG

Protein sequence :
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETYLNYHNGRIHLCQILKQTFLDEELLFKALANWKPAAFQGIPQ
RLFLLRDGLAMSFSPPLSSSAELWLRLHHRQIKFLESQCVHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaM NP_805084.1 pathogenicity island protein Virulence SPI-2 Protein 2e-51 99
ssaM NP_460378.1 type III secretion system apparatus protein Virulence SPI-2 Protein 5e-52 99
STY1707 NP_456115.1 putative pathogenicity island protein Virulence SPI-2 Protein 2e-51 99
ssaM YP_216421.1 secretion system apparatus protein SsaM Virulence SPI-2 Protein 1e-51 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeD_A1930 YP_002215719.1 secretion system apparatus protein SsaM VFG0513 Protein 1e-52 99