Gene Information

Name : NH44784_019131 (NH44784_019131)
Accession : YP_008029006.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2028121 - 2028810 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATACTGGTCATTGAAGACGAAAAAAAACTCGCTGAGTACCTGCGCCGCGCGCTGACCGAACACAGCTATGTGGT
CGATGTGGCGATGGACGGCGTCAGCGGCCTGCACCTGGCGCGCGAAAGCCAGTACGACCTGATCCTGCTGGACGTGATGC
TGCCGGGCATGGATGGCTTTTCCGTCCTGCACGAACTGCGCAAGACCGACCGCGTGCCGGTGCTGATGCTGACCGCGCGC
GACAAGCTGGAGGACCGCGTCAAGGGCCTGCGTGACGGCGCCGACGATTACCTGGCCAAGCCGTTCGCCCTGTCCGAACT
GCTGGCGCGGGTGCTGGCGCTGGGACGCCGCAGCGGCCACAACGTGGCCGAGGCGGGTGGCCAGAACGTGCTGCGCATCG
GCGACCTGGAACTCGACCTGCTGCGCCGGCGCGCCTACCGCGCCGGCACGCGGCTGGACCTGACGGCCAAGGAATTCACC
TTGCTGGCGCTGCTGATGCGCAAGCAGGGCGAAGTGCTGTCGCGGCTGGAACTGGCCGAGCAGGTGTGGGACATCAATTT
CAACAGCAATACCAATGTGGTGGAAGTGGCGGTGCGGCGCCTGCGCGGCAAGGTCGACGACCCCTTCGAGAAGAAGCTGC
TGCACACCGTGCGTGGCATGGGCTACGTGCTGGAAACGCGGGACGACTGA

Protein sequence : 
MKILVIEDEKKLAEYLRRALTEHSYVVDVAMDGVSGLHLARESQYDLILLDVMLPGMDGFSVLHELRKTDRVPVLMLTAR
DKLEDRVKGLRDGADDYLAKPFALSELLARVLALGRRSGHNVAEAGGQNVLRIGDLELDLLRRRAYRAGTRLDLTAKEFT
LLALLMRKQGEVLSRLELAEQVWDINFNSNTNVVEVAVRRLRGKVDDPFEKKLLHTVRGMGYVLETRDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-54 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-53 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator BAC0083 Protein 1e-59 59
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator BAC0197 Protein 2e-61 59
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator BAC0125 Protein 6e-64 57
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator BAC0638 Protein 1e-51 57
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator BAC0111 Protein 2e-58 54
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator BAC0308 Protein 7e-52 51
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator BAC0347 Protein 2e-51 49
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator HE999704.1.gene1528. Protein 6e-33 42
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator NC_012469.1.7685629. Protein 1e-32 42
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator NC_002516.2.879194.p Protein 4e-29 41
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator AE000516.2.gene3505. Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator VFG0596 Protein 1e-54 54
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator VFG1389 Protein 2e-36 47
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator VFG1390 Protein 2e-41 46
NH44784_019131 YP_008029006.1 DNA-binding heavy metal response regulator VFG1386 Protein 2e-37 44