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Name : SeD_A1962 (SeD_A1962) Accession : - Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 1894013 - 1894906 bp Length : 894 bp Strand : + Note : proline iminopeptidase like protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250 DNA sequence : ATGAATGATACTTATCTCTATGGCGAAATGTTTTCTGAAAACATATTGACAAGCTATCGGATTTATGGAGACAGAAAATC ATTACTCACGCCGCTCATTATCCTTCATGGCGGCCCTTCTGGCGGCTTTGATTATTTATTAAATTATCGCCGTCTGGCTG ATGACGGGCGCATGGTAATATTTTACGATCAATATGGCTGCGGTCGTTCAACGCATTTTCCTCATGCTGACGCGTCTTTC TGGACTATTGCGCGTTATCTCAGTCAATTAACCCAATTAATTCATCACCTGGGTATTGGACACGGGTATTCGATACTGGG ACATTCCTGGGGCGGAATGCTTGCCGCAGAGCACGCCTGCTTACAGCCTGCCGGGCTTCGCGGGACGATACTGGCCAGTT CGCCGGCCAGTATCGCCCTGTGGCAACAGGAAGCCATACGGCTCTTTAACGCTCTGACGCCAATGTCCGATGACGATATC AAAAACGTCATTATGCCCGCCGTCATTTATCAAAACCCACCGGAACAGCTGGTCGCTTATTATGCCAGACACGTTTATAC CCTCGCGGAAGAAGCCGTTCATGTTCAGCGCTCTAATGCGCAGTTCGCCGCCGACCCTACGGGTTATCACATTTTATGGG GAACCAATGAACTGGCGGCAAATGGCAAACTTGCCGACTGGGATATTACGCCCCATTTGTGCCAGATACGCTGTCCTGTT CTGGTACTGCGCGGCGAAAACGATCAGGCAACCGAGCGCGTCGTCTCTCCGCTTCTCTCTCACATTTCAGACTGCCGCGC GGTCACTATTCCTGGCAGCAGCCATAACCCGCATGAAGAAAATATCGCGCCCTGCCTCGCAGCGGTAAGCGCGTTTTTAC GCGATCTGGCATAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf32 | NP_460345.1 | proline iminopeptidase | Not tested | SPI-2 | DNA | 0.0 | 99.6 |
| pip | YP_216388.1 | hydrolase or acyltransferase | Not tested | SPI-2 | DNA | 0.0 | 99.6 |
| ORF32 | CAA68203.1 | proline iminopeptidase like protein | Not tested | SPI-2 | DNA | 0.0 | 99.5 |
| STY1742 | - | putative pathogenicity island protein (pseudogene) | Not tested | SPI-2 | DNA | e-224 | 98.8 |
| t1248 | - | - | Not tested | SPI-2 | DNA | e-224 | 98.8 |
