Gene Information

Name : dhaS (RBAU_1875)
Accession : YP_008412869.1
Strain : Bacillus amyloliquefaciens UCMB-5033
Genome accession: NC_022075
Putative virulence/resistance : Virulence
Product : putative aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 2049624 - 2051111 bp
Length : 1488 bp
Strand : +
Note : Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme

DNA sequence :
ATGAGTTCTTTAACGATGCAGATCACAAAAAGGCTGGAAACATTTTTACAGGGCACGAAGAAACTTTATATTGACGGAAA
ATTTGTTCCTAGCGCTTCAGGATCAACATTTGTCACACCGAATCCGGCAACCGGAGAAACGCTGATGACGCTTTACGAGG
CACAGACAGAAGACATTGACAGTGCAGTGAAAGCGGCACGCAAAGCCTTTGATCACGGCGAATGGCGCACTATGCCGGCC
GCTTCCAGAAGCAGGCTGATGTATAAGCTTGCCGATTTAATGGAAGAGCACAAAACGGAACTCGCGCAGCTTGAAACACT
TGATAACGGAAAACCGATTAATGAAACGACGAATGGGGATATCCCGCTTGCAATTGAGCATATGCGTTATTATGCCGGAT
GGTCTACAAAGATAACCGGACAAACGATTCCGGTCGCCGGCTCATATTTTAATTACACCCGCCATGAGCCTGTCGGCGTC
GTGGGGCAGATCATCCCTTGGAACTTCCCGCTCCTTATGGCGATGTGGAAAATGGGCGCCGCCCTTGCCACAGGCTGCAC
AATCGTTTTGAAACCGGCCGAGCAGACACCGCTGACCGCCCTCTATTTAGCGGAATTAATAGATCAGGCGGGCTTCCCTG
ACGGCGTCATCAATATTGTTCCAGGGTTCGGCGAGACGGCCGGGGAAGCGCTGACCAACCATGACGATGTCGATAAACTC
GCTTTTACCGGCTCTACAGAAATCGGCAAAAAAATCATGGAAAAAGCCGCAAAAAAAATTAAACGCGTGACACTGGAGCT
TGGCGGAAAGTCACCTAACATCATTTTGCCTGACGCCAATTTGAAGAAAGCCATTCCCGGCGCTTTAAACGGGGTCATGT
TTAATCAGGGGCAGGTATGCTGCGCAGGCTCCCGTGTCTTCATTCACAAAGACAAATATGATGAGGTCGTCAGCGAAATG
GTTTCATATGCGAAATCGCTTCAGCAAGGCGCCGGCCTTCACCAAGATACACAAATCGGCCCGCTCGTCAGTCAGGAACA
GCATGAGCGCGTGCTTTCATATATTGAAAAAGGAAAAGCGGAAGGAGCCAAAGCTGTCGCGGGCGGCAGCTGCCCGTTTG
AAGAAGGGTATTTTGTCTCCCCGACTGTATTTGCGGATGTGGATGACAGCATGACCATCGCAAAAGAAGAAATTTTCGGC
CCTGTTTTAGCCGCCATTCCGTATGATACGGTAGATGAAGTCATTGAGCGGGCGAACCGCTCGGAATACGGCCTTGCAGC
CGGACTTTGGACTGAGAATGTGAAAAACGCCCATTACATTGCTGACCGTCTCCAAGCCGGCACCGTTTGGGTCAACTGCT
ACAATGTTTTCGATGCGGCATCTCCTTTCGGCGGCTATAAGCAATCCGGCCTCGGGCGGGAAATGGGCTCTTACGCGCTG
AATAATTATACAGAAGTGAAAAGCGTCTGGATCAATCTGGAAGATTAA

Protein sequence :
MSSLTMQITKRLETFLQGTKKLYIDGKFVPSASGSTFVTPNPATGETLMTLYEAQTEDIDSAVKAARKAFDHGEWRTMPA
ASRSRLMYKLADLMEEHKTELAQLETLDNGKPINETTNGDIPLAIEHMRYYAGWSTKITGQTIPVAGSYFNYTRHEPVGV
VGQIIPWNFPLLMAMWKMGAALATGCTIVLKPAEQTPLTALYLAELIDQAGFPDGVINIVPGFGETAGEALTNHDDVDKL
AFTGSTEIGKKIMEKAAKKIKRVTLELGGKSPNIILPDANLKKAIPGALNGVMFNQGQVCCAGSRVFIHKDKYDEVVSEM
VSYAKSLQQGAGLHQDTQIGPLVSQEQHERVLSYIEKGKAEGAKAVAGGSCPFEEGYFVSPTVFADVDDSMTIAKEEIFG
PVLAAIPYDTVDEVIERANRSEYGLAAGLWTENVKNAHYIADRLQAGTVWVNCYNVFDAASPFGGYKQSGLGREMGSYAL
NNYTEVKSVWINLED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-86 47
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-82 45
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 44
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 44
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-83 44
hpaE AAO17179.1 HpaE Not tested tcd island Protein 6e-70 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dhaS YP_008412869.1 putative aldehyde dehydrogenase VFG0082 Protein 1e-82 45