Gene Information

Name : copS (SPUCDC_1948)
Accession : YP_008481577.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : histidine kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1946363 - 1947712 bp
Length : 1350 bp
Strand : +
Note : -

DNA sequence :
ATGACGCTGCGCCTGACAATTTCTTTTATCGCCATCCTTATCCTCGCCTGTACCGGCATTAGCTGGACGCTCTATAACGC
GCTGAGCAAAGAATTAACGTATCGTGATGATATGACGCTAATAAATCGGGCGGCGCAAATGCAGCAACTGTTACTGGATG
GCGCCAGGCCGGAAAATCTGCCGCTCTATTTCAATCGGATGGTGGATACGAAGCAGGATATCTTATTGATCCATTCAGCA
ACAGGCCACAATGTTGCGATTAATCATAGCGGCATCCCCGACCAACGCTTTAACGAGATTCCGCTGGCTAAAAACATCAC
CCGCGAAACCTTATTTCGCCAGGCGGTACAAGGCACGGAACTTACCGCGGTACGAGTAAACGCCAGAAGCGGCGATGACC
CGCTGACCCTTACTATTGCCAGGCTGGCGACGGAAAGGCGGCAAATGCTGACGCAATATCGCCGCAACAGTTTGCTGATG
AGCCTTATCGCGATCCTCGTCTGTTCGGCGCTCAGTCCATTAGTCATCAGAAACGGGCTGCGGGCCATTACGTCGCTCAG
CCGACTCACCGCGGCGACAGATAGCGGCACACTTCGCCAGCCGTTGGCGGAACAGGCGTTACCCGTTGAGCTCAGGCCGC
TTGGACAAGCGCTAAATACCATGCGCCAGAAGCTTTCCGACGATTTTGAACGCCTGAACCAATTTGCCGACGATCTGGCG
CATGAGCTGCGCACGCCGGTTAATATTTTACTGGGGAAGAATCAGGTGATGCTGAGTCAGGAACGCAGCGCCGAAGAGTA
TCAACAAGCCCTTGTCGATAATATTGAAGAGCTGGAGGGACTGTCGCGACTGACAGAAAATATTCTCTTTCTGGCACGCG
CGGAGCACCAGAATATAGCGGTAAAAAAACAGCCTGTTTCGCTCAATGCGCTGGTCGAAAATATGCTGGATTATCTTAGC
CCCCTTGCCGAGGAGAAGCGCATCTGTTTTATAAATCAATGTCAGGGAACGGTATGGGCTGACGAAATATTATTACAAAG
AGTGCTCTCAAACCTGCTGACGAATGCCATCCGTTATTCTGATGAAAACGCCGTGATACGTATTGAAAGCGCTTATGATG
ATAACGTTGCAGAAATTCGGGTCGCTAATCCGGGCAGCCACCCAGCCGATGCGGATAAGCTTTTCCGGCGTTTTTGGCGA
GGAGATAATGCCCGCCACACTGCCGGTTTCGGCCTGGGGTTATCGTTAGTTAACGCGATTGCTCTATTACACGGTGGTTC
GGCATCTTACCGCTATGCCGATGAACATAATATCTTTTCGGTTCGTCTGCCCGATAGCGGTGATAGCTAA

Protein sequence :
MTLRLTISFIAILILACTGISWTLYNALSKELTYRDDMTLINRAAQMQQLLLDGARPENLPLYFNRMVDTKQDILLIHSA
TGHNVAINHSGIPDQRFNEIPLAKNITRETLFRQAVQGTELTAVRVNARSGDDPLTLTIARLATERRQMLTQYRRNSLLM
SLIAILVCSALSPLVIRNGLRAITSLSRLTAATDSGTLRQPLAEQALPVELRPLGQALNTMRQKLSDDFERLNQFADDLA
HELRTPVNILLGKNQVMLSQERSAEEYQQALVDNIEELEGLSRLTENILFLARAEHQNIAVKKQPVSLNALVENMLDYLS
PLAEEKRICFINQCQGTVWADEILLQRVLSNLLTNAIRYSDENAVIRIESAYDDNVAEIRVANPGSHPADADKLFRRFWR
GDNARHTAGFGLGLSLVNAIALLHGGSASYRYADEHNIFSVRLPDSGDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copS NP_460068.1 copper resistance protein Not tested SPI-5 Protein 0.0 99
copS AAC33720.1 histidine kinase Not tested SPI-5 Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copS YP_008481577.1 histidine kinase VFG0595 Protein 0.0 99