Name : Sde_1948 (Sde_1948) Accession : YP_527420.1 Strain : Saccharophagus degradans 2-40 Genome accession: NC_007912 Putative virulence/resistance : Virulence Product : Heavy metal response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2450044 - 2450724 bp Length : 681 bp Strand : + Note : - DNA sequence : ATGCGGTTACTAGTAGTCGAAGACGAAGTCAAAACCGGGGATTATTTGCAGCAAGGCCTGAGCGAAGCCGGCTTTATGGT GACGCTCGCTCGGAACGGTCTCGATGGCCATCACCTGGCGATGACGGAGACCTTTGATTTGTTGATTCTCGATGTGATGC TGCCCGATGTGGGCGGCTGGCGCATTGTTCAGTCCATAAGAGAATCGGGATGCCAGGCGCCCGTATTATTTCTCACCGCG CGCGACAGTGTTGATGATCGTGTTAAAGGATTAGAACTTGGCGCTGATGACTACCTGGTTAAGCCCTTCGCGTTTGCCGA ATTGCTGGCTCGGGTACGCACCTTGTTGCGTAGAAGTACGGCGCCGGTACTCGCCGATCAGATCACAGTAGCGGATTTGA TCCTCGATCTGCCAAAGCATCGTGCCCTTCGTGGTGGGCGCAAAATCAATCTCAGTCATAAGGAATTTTGTTTGCTGGAA CTGCTTGCTCGGCGCCAGGGTGAAGTGCTGCCACGCTCGTTGATTGCTTCCCAGGTGTGGGATATGAATTTTGACTCCGA TACCAATGTGATTGATGTCGCCATCCGTCGTTTAAGAAGCAAAATTGATGAAGGCTTTGAGCCCAAGCTGATCCATACCG TTCGTGGCATGGGCTACAAACTCGATGTTGAGGACGAATAG Protein sequence : MRLLVVEDEVKTGDYLQQGLSEAGFMVTLARNGLDGHHLAMTETFDLLILDVMLPDVGGWRIVQSIRESGCQAPVLFLTA RDSVDDRVKGLELGADDYLVKPFAFAELLARVRTLLRRSTAPVLADQITVADLILDLPKHRALRGGRKINLSHKEFCLLE LLARRQGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRSKIDEGFEPKLIHTVRGMGYKLDVEDE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 7e-58 | 56 |
copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 3e-57 | 55 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Sde_1948 | YP_527420.1 | Heavy metal response regulator | BAC0083 | Protein | 6e-71 | 67 |
Sde_1948 | YP_527420.1 | Heavy metal response regulator | BAC0111 | Protein | 5e-74 | 67 |
Sde_1948 | YP_527420.1 | Heavy metal response regulator | BAC0638 | Protein | 4e-65 | 67 |
Sde_1948 | YP_527420.1 | Heavy metal response regulator | BAC0308 | Protein | 2e-66 | 64 |
Sde_1948 | YP_527420.1 | Heavy metal response regulator | BAC0125 | Protein | 2e-64 | 63 |
Sde_1948 | YP_527420.1 | Heavy metal response regulator | BAC0197 | Protein | 2e-64 | 63 |
Sde_1948 | YP_527420.1 | Heavy metal response regulator | BAC0347 | Protein | 2e-65 | 60 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Sde_1948 | YP_527420.1 | Heavy metal response regulator | VFG0596 | Protein | 3e-58 | 56 |
Sde_1948 | YP_527420.1 | Heavy metal response regulator | VFG1389 | Protein | 3e-36 | 46 |
Sde_1948 | YP_527420.1 | Heavy metal response regulator | VFG1390 | Protein | 2e-41 | 44 |
Sde_1948 | YP_527420.1 | Heavy metal response regulator | VFG1386 | Protein | 1e-34 | 41 |