Gene Information

Name : Amir_1982 (Amir_1982)
Accession : YP_003099776.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Unknown
Product : glycoside hydrolase family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1472
EC number : -
Position : 2197172 - 2199595 bp
Length : 2424 bp
Strand : -
Note : PFAM: glycoside hydrolase family 3 domain protein; KEGG: vei:Veis_0942 glycoside hydrolase, family 3 domain protein

DNA sequence :
ATGGCGAACAGGACGGCGGACGGTGGCTCCCCCTGGCGGGACGCGCGCCTGCCGGTGGCCGATCGGGTCGGGGCGCTGCT
CTCGGCCATGACGCTCCGCGAGAAGCTCGCCCAGCTCGTGGGCGTCTGGGTGGGGGCCGACCCCGAGGGCGGGGACGTCG
CGCCGCACCAGTCCGAGCTGACCGGCGACCCCGTCGACTGGACCGAGGTGATCTCCGCCGGGCTCGGCCAGCTGACCAGG
CCGTTCGGCACCAGGCCGGTCGACCCGGTGCTCGGCGCTCGGTCGCTGGCCTCCGCGCAGGAGCAGATCACCGCCGCCAG
CCGGTTCGGCATTCCAGCACTGGTGCACGAGGAGTGCCTCACCGGGTTCGCCGCCTGGCGCGCCACCGCGCACCCGGCCC
CGCTGTCCTGGGGCGCCTCGTTCCGGCCGGAGCTGGTCCGGGCCATGGCCGGGCGGATCGGCGCGTCCATGCGGGCGGCG
GGCGTGCACCAGGGGCTCGCGCCGGTGCTGGACGTGACCCGCGACTACCGCTGGGGGCGCACCGAGGAGACCATCGGCGA
GGACCCGCTGCTGGTCGGCGTGGTCGCCACCGCGTACGTGCGGGGGCTGGAGGACGCCGGGGTCGTGGCCACCCTCAAGC
ACTTCGCGGGCTACTCGGCCTCGCGGGCGGGCCGCAACCTCGGACCGGTGTCCATCGGGCCGCGCGAGCTGGCCGACGTG
GTCCTGCCGCCGTTCGCGATGGCGGTGCGCGACGGCGGCGCGCGGTCGGTGATGAACTCCTACAGCGAGCTGGACGGCGT
GCCCTCGGCCGCCGACGCCGGGCTGCTGACCGGGCTGCTGCGCGAGGGGTGGGGCTTCACCGGGACCGTGGTCGCCGACT
ACTTCTCGATCAAGTTCCTCCAGACCCTGCACGGCGTCGCGGGCGACGAGGAGCAGGCCGCCGCGCTCGCCCTCCGCGCG
GGGATCGACGTCGAGCTGCCGACCGTGCGCTGCTACGGGGAACCGCTGCTGCGCGCGGTCTCGCGCGGTGACGTCCCGGA
GGAGCTGGTGGACCGGGCGGTGCGCCGGGTGCTGGCGCAGAAGGCGGAGCTGGGACTGCTCGACCCGGACTGGTCGCCGC
TGCCCGAGTCGGTGGACTCGCTGGAGCTGGACGACGCCGGCTCGCGGACCATCGCGCTGGAGCTGGCGCGCGAGTCGGTG
GTGCTGCTGGCCGACGGCGGCGGCGCGCTGCCGCTGCGGCCGTCCGCGCGGGTCGCGCTCGTGGGGCCGCTGGCGGACGA
CCCGATGGCGATGCTGGGCTGCTACTCGTTCCCCGCGCACATCGGCGTGCACCACCCGGACGCCGGGCTGGGCCTGGAGA
TCCCGACCGTGCGGGACGGGCTGCGCGGGCTGGGTGTCGAGGTGGCGCACGCGGTGGGCTGCGCGGTCGACGGCGACGAC
CGGTCCGGGTTCGCCGACGCGGTGGCGGCGGCGCGGGACGCGGACGTGTGCGTGGTGGCGGTGGGCGACCGGGCCGGGCT
GTTCGGGCGCGGCACGTCCGGCGAGGGCTGCGACGCGACCGACCTGACCCTGCCGGGCGTGCAGGCGGAGCTGGTGCGGG
AGGTGCTGGCGACCGGGACCCCGGTGGTGCTGCTGCTGATCACCGGCCGCCCGTACGCGGTGGGCGAGCTGGTGGCGGGG
TCGGCGGCGGCGGTGCAGGCGTTCTTCCCCGGCCAGCTGGGCGGGCGGGCGATCGCCGAGGTGCTGACCGGCGCGGTCAA
CCCGTCCGGACGACTGCCGGTGAGCATCCCGGCCGATCCTTCCGGGCAGCCGGGGACGTACCTGTCGGCGCCGCTGGGAC
GGCGCACCGGGGTGTCCACCGTGGACCCGACGCCCGCGTTCCCGTTCGGGCACGGGCTGTCGTACGGCGGGTTCACCTGG
TCGAAGCCCGTGGTGTCGGCGGCGGAGTGGCCGGTGGACGGCGAGGTGCGGGTGGAGCTGGAGGTGCGCAACACCGGCGG
GGTCGACGGGTCGGACGTGGTGCAGCTGTACCTGCACGACCCGGTGGCGTCGGTGACGCGGCCGGTGGTGCGGCTGGTCG
GGTTCGCGAAGGTCGACCTGGTGGCGGGGGCGGCGGCGCGGGTGGTGCTCGCCGTGCCCGCCGACGTGGCCGCGTTCACC
GGGCTGGACGGGCGGGTGGTCGTGGAGCCGGGCGAGATCCGGCTGCGGGTGTCCCGGTCGAGCGCGGACGTGCACGGCGA
GCTGGTGGTGGACCTGGTGGGCGGGGTGCGCGAGGTGGCGCACGCGACCCGGCGGTGGACGGCGACGGCGCTGGTCGAGC
CGGTGCGGTCGGGCGGCGCGCCGGAGCGGGTCGAGCCGGCGGGGTCGGGAGGCGCGCCGGGGGCGCTCGCGGGCGCGGCG
GCCGGAGAGGCTGCGGGGGCATGA

Protein sequence :
MANRTADGGSPWRDARLPVADRVGALLSAMTLREKLAQLVGVWVGADPEGGDVAPHQSELTGDPVDWTEVISAGLGQLTR
PFGTRPVDPVLGARSLASAQEQITAASRFGIPALVHEECLTGFAAWRATAHPAPLSWGASFRPELVRAMAGRIGASMRAA
GVHQGLAPVLDVTRDYRWGRTEETIGEDPLLVGVVATAYVRGLEDAGVVATLKHFAGYSASRAGRNLGPVSIGPRELADV
VLPPFAMAVRDGGARSVMNSYSELDGVPSAADAGLLTGLLREGWGFTGTVVADYFSIKFLQTLHGVAGDEEQAAALALRA
GIDVELPTVRCYGEPLLRAVSRGDVPEELVDRAVRRVLAQKAELGLLDPDWSPLPESVDSLELDDAGSRTIALELARESV
VLLADGGGALPLRPSARVALVGPLADDPMAMLGCYSFPAHIGVHHPDAGLGLEIPTVRDGLRGLGVEVAHAVGCAVDGDD
RSGFADAVAAARDADVCVVAVGDRAGLFGRGTSGEGCDATDLTLPGVQAELVREVLATGTPVVLLLITGRPYAVGELVAG
SAAAVQAFFPGQLGGRAIAEVLTGAVNPSGRLPVSIPADPSGQPGTYLSAPLGRRTGVSTVDPTPAFPFGHGLSYGGFTW
SKPVVSAAEWPVDGEVRVELEVRNTGGVDGSDVVQLYLHDPVASVTRPVVRLVGFAKVDLVAGAAARVVLAVPADVAAFT
GLDGRVVVEPGEIRLRVSRSSADVHGELVVDLVGGVREVAHATRRWTATALVEPVRSGGAPERVEPAGSGGAPGALAGAA
AGEAAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bglB YP_001220821.1 putative beta-glucosidase Not tested chp/tomA region Protein 4e-91 41