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Name : rnhA (APECO1_1776) Accession : YP_851409.1 Strain : Escherichia coli APEC O1 Genome accession: NC_008563 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 240481 - 241059 bp Length : 579 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : GTGGTTTCGGTATCGAGAACGATCTGGCGTGTAATTGCAGTGCTCATAGCGGTCATTTATGTCAGACTTATCGTTTTACA GTTCGATTCAATTACAGGAAGTCTACCAGAGATGCTTAAACAGGTAGAAATTTTCACCGATGGTTCGTGTCTGGGTAATC CTGGACCTGGGGGTTACGGCGCTATTTTACGCTATCGCGGACGCGAGAAAACCTTTAGCGCTGGCTACACCCGCACCACC AACAACCGTATGGAGTTGATGGCCGCTATTGTCGCGCTGGAGGCGTTAAAAGAACATTGCGAAGTCATTTTGAGTACCGA CAGCCAGTATGTCCGCCAGGGTATCACCCAGTGGATCCATAACTGGAAAAAACGTGGTTGGAAAACAGCAGACAAAAAAC CAGTAAAAAATGTCGATCTCTGGCAACGTCTTGATGCTGCTCTGGGGCAGCATCAAATCAAATGGGAATGGGTTAAAGGC CATGCCGGACACCCGGAAAACGAACGCTGTGATGAACTGGCTCGTGCTGCGGCAATGAATCCCACACTGGAAGATACAGG CTATCAAGTCGAAGTTTAA Protein sequence : MVSVSRTIWRVIAVLIAVIYVRLIVLQFDSITGSLPEMLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTT NNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKG HAGHPENERCDELARAAAMNPTLEDTGYQVEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 4e-54 | 75 |
