Gene Information

Name : CFSAN002050_11830 (CFSAN002050_11830)
Accession : YP_008260281.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : virulence protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2142959 - 2143639 bp
Length : 681 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCTTCCGGTCACCTACAGATTAATACCTCAAAGCGGAGTATCCACATATGGATTAAATACCGCAGATACACCTGTTTT
CCCCGATATTCCCGAACATGCACCAAACCCCTCACGGCTACGCCTTGCTCATGACAGCCTTGCCATAAACAGTGAATTCC
GTCTGGAGCCAGAGTGTGTGGTGGAGTACCTTATCTCAGGCGCGGGTGGAATAGACCCTGATACAGAAATTGATGACGAC
ACTTATGACGAATGCTACGATGAACTATCCTCCGTACTTCAAAATGCGTATACCGAAAGCGAAACATTCCGCAGACTGAT
GAATTACGCATATGAAAAAGAACTACATGATGTGGAGCAGCGCTGGCTACTGGGGGCAGGCGAAGCCTTTGAAACTACCG
TGACTCAGGAACACTTCAAACTTTCAGAAGGCAGGAAAGTTATTTGTCTCAATCTGGACGATTCTGATGATTCATATACC
GAACATTATGAAAGTAACGAAGGACCACAACTTTTTGACACAAAACGTTCATTTATTCATGAAGTTGTACATGCACTGAC
CCATCTTCAGGATAAAGAAGAAAATCATCCAAGAGGCCCTGTTGTCGAATATACCAACATTATTCTGAAAGAGATGGGGC
ATCCTTCACCTCCCAGAATGGTCTACATCTTCAATAAATAG

Protein sequence :
MLPVTYRLIPQSGVSTYGLNTADTPVFPDIPEHAPNPSRLRLAHDSLAINSEFRLEPECVVEYLISGAGGIDPDTEIDDD
TYDECYDELSSVLQNAYTESETFRRLMNYAYEKELHDVEQRWLLGAGEAFETTVTQEHFKLSEGRKVICLNLDDSDDSYT
EHYESNEGPQLFDTKRSFIHEVVHALTHLQDKEENHPRGPVVEYTNIILKEMGHPSPPRMVYIFNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipA NP_460060.1 pathogenicity island-encoded protein A Virulence SPI-5 Protein 2e-92 99
pipA NP_455585.1 conserved hypothetical protein Virulence SPI-5 Protein 7e-92 98
pipA AAC33726.1 PipA Virulence SPI-5 Protein 6e-93 98
pipA YP_216026.1 pathogenicity island encoded protein: SPI3 Virulence SPI-5 Protein 2e-91 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_11830 YP_008260281.1 virulence protein VFG0588 Protein 9e-93 99