Gene Information

Name : CFSAN002050_11845 (CFSAN002050_11845)
Accession : YP_008260284.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : type III secretion chaperone protein SigE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2145719 - 2146060 bp
Length : 342 bp
Strand : -
Note : SigE; IpgE; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGAAAGTCTATTAAATCGTTTATATGCCGCGTTAGGCCTGGATGCGCCAGAAGATGAACCACTTCTCATCATTGATGA
TGGAATACAGGTTTATTTTAATGAATCCGATCATACACTGGAAATGTGCTGTCCCTTTATGCCATTGCCTGACGACACTC
TGACTTTGCAGCATTTTTTACGTCTTAACTACGCCAGCGCCGTCACTATCGGCGCTGACGCAGACAATACTGCTTTAGTG
GCGCTTTATCGCTTGCCGCAAACCAGTACCGAAGAAGAGGCGCTCACTGGTTTTGAATTATTCATTTCTAACGTGAAGCA
ATTGAAAGAGCGTTATGCATAA

Protein sequence :
MESLLNRLYAALGLDAPEDEPLLIIDDGIQVYFNESDHTLEMCCPFMPLPDDTLTLQHFLRLNYASAVTIGADADNTALV
ALYRLPQTSTEEEALTGFELFISNVKQLKERYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sigE NP_455587.1 cell invasion protein Virulence SPI-5 Protein 2e-46 99
pipC AAC33724.1 PipC Virulence SPI-5 Protein 1e-46 99
pipC NP_460063.1 pathogenicity island-encoded protein C Virulence SPI-5 Protein 4e-46 97
pipC YP_216029.1 hypothetical protein Virulence SPI-5 Protein 4e-46 97
sigE AAS66828.1 SigE Not tested SSR-1 Protein 1e-20 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_11845 YP_008260284.1 type III secretion chaperone protein SigE VFG0591 Protein 1e-46 97