Gene Information

Name : SU5_02012 (SU5_02012)
Accession : YP_006087646.1
Strain : Salmonella enterica B182
Genome accession: NC_017623
Putative virulence/resistance : Virulence
Product : Type III secretion protein SsaD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2218513 - 2219712 bp
Length : 1200 bp
Strand : +
Note : -

DNA sequence : 
ATGGTTAATCCAAAGAGTTCCTGGAAAATACGTTTTTTAGGTCACGTTTTACAAGGCCGGGAAGTATGGCTGAATGAAGG
TAACCTGTCACTGGGGGAGAAGGGATGCGATATTTGTATTCCGCTGGCTATAAATGAAAAAATTATTCTGAGAGAACAGG
CAGATAGTTTATTTGTTGATGCCGGGAAAGCCAGAGTTAGAGTTAATGGTCGCAGATTTAATCCAAATAAGCCGCTACCA
TCCAGTGGGGTTTTGCAGGTTGCGGGAGTGGCTATCGCGTTTGGTAAACAGGATTGTGAACTTGCTGATTATCAAATACC
CGTTTCCAGATCAGGGTACTGGTGGTTGGCTGGCGTATTCTTGATTTTCATCGGTGGAATGGGTGTCCTGTTAAGTATTA
GTGGTCAGCCTGAAACGGTAAATGACTTACCTTTGCGGGTTAAGTTTTTATTAGACAAAAGCAATATTCATTATGTGCGG
GCGCAATGGAAAGAAGATGGAAGCCTGCAGTTGTCCGGTTATTGCTCGTCAAGCGAACAGATGCAAAAGGTGAGAGCGAC
TCTCGAATCATGGGGGGTCATGTATCGGGATGGTGTAATCTGTGATGACTTATTGATACGAGAGGTGCAGGATGTTTTGA
TAAAAATGGGTTACCCGCATGCTGAAGTATCCAGCGAAGGGCCGGGGAGCGTGTTAATTCATGATGATATACAAATGGAT
CAGCAATGGCGTAAGGTTCAACCATTACTTGCAGATATTCCCGGGTTATTGCACTGGCAGATTAGTCACTCTCATCAGTC
TCAGGGGGATGATATTATTTCTGCGATAATAGAGAACGGTTTAGTGGGGCTTGTCAATGTTACGCCAATGCGGCGCTCTT
TTGTTATCAGTGGTGTACTGGATGAATCTCATCAACGCATTTTGCAAGAAACGTTAGCAGCATTAAAGAAAAAGGACCCC
GCTCTTTCTTTAATTTATCAGGATATTGCGCCTTCTCATGATGAAAGCAAGTATCTGCCCGCGCCAGTGGCTGGCTTTGT
ACAGAGTCGCCATGGTAATTACTTATTACTGACGAATAAAGAGCGTTTACGTGTAGGGGCATTGTTACCCAATGGAGGAG
AAATTGTCCATCTGAGTGCCGATGTGGTAACGATTAAACATCATGATACTTTGATTAACTATCCATTAGATTTTAAGTGA

Protein sequence : 
MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVDAGKARVRVNGRRFNPNKPLP
SSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVR
AQWKEDGSLQLSGYCSSSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVLDESHQRILQETLAALKKKDP
ALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNKERLRVGALLPNGGEIVHLSADVVTIKHHDTLINYPLDFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaD NP_460360.1 virulence protein Virulence SPI-2 Protein 0.0 99
ssaD YP_216403.1 secretion system apparatus protein SsaD Virulence SPI-2 Protein 0.0 99
ssaD NP_456133.1 putative pathogenicity island protein Virulence SPI-2 Protein 0.0 99
ssaD NP_805066.1 pathogenicity island protein Virulence SPI-2 Protein 0.0 99
spiB AAC44302.1 SpiB Virulence SPI-2 Protein 1e-149 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_02012 YP_006087646.1 Type III secretion protein SsaD VFG0496 Protein 0.0 99