Gene Information

Name : SU5_02028 (SU5_02028)
Accession : YP_006087662.1
Strain : Salmonella enterica B182
Genome accession: NC_017623
Putative virulence/resistance : Virulence
Product : Type III secretion cytoplasmic protein (YscL)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2228907 - 2229872 bp
Length : 966 bp
Strand : +
Note : -

DNA sequence : 
ATGACGCCCCCTACAGCATTTACCCCTGGCCAGGTTATAGAGGAACAAGAGGTTATTTCGCCTTCAATGTTAGCTCTCCA
GGAGTTACAGGAAACGACGGGGGCAGCGCTCTATGAGACGATGGAAGAAATAGGAATGGCGCTGAGTGGTAAACTGCGCG
AAAATTATAAATTCACTGATGCTGAGAAACTGGAGCGCAGACAGCAGGCTTTGCTGCGTTTGATAAAACAAATACAGGAG
GATAATGGGGCAACGTTGCGTCCGCTTACCGAAGAGAATAGTGATCCTGATTTACAGAATGCGTATCAAATTATCGCTCT
TGCAATGGCGCTTACTGCCGGCGGGTTGTCAAAAAAGAAAAAACGCGATTTGCAATCGCAACTGGATACGCTTACAGCGG
AGGAGGGATGGGAACTTGCCGTTTTTAGTTTACTGGAACTTGGCGAAGTGGATACCGCTACGCTGTCCTCTCTGAAACGT
TTTATGCAACAGGCGATAGACAACGATGAAATGCCCTTATCGCAGTGGTTCAGACGCGTGGCAGACTGGCCGGATCGCTG
TGAACGGGTCCGTATTTTGCTAAGAGCCATAGCCTTTGAACTTAGCATATGCATCGAACCTTCGGAGCAAAGTCGTTTGG
CCGCAGCATTAGTACGTTTGCGTCGTTTGCTGTTATTCCTTGGCCTTGAAAAAGAGTGCCAGCGTGAGGAGTGGATTTGC
CAGTTGCCGCCTAATACATTACTGCCGCTACTACTCGATATCATTTGTGAGCGCTGGCTTTTCAGTGATTGGTTGCTTGA
TAGACTTACCGCTATAGTTTCTTCATCGAAGATGTTCAATCGGTTACTCCAACAACTTGATGCGCAGTTTATGCTGATAC
CCGATAACTGTTTTAACGACGAAGATCAACGTGAACAAATTCTCGAAACGCTTCGTGAAGTAAAGATAAATCAGGTTTTA
TTCTGA

Protein sequence : 
MTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEEIGMALSGKLRENYKFTDAEKLERRQQALLRLIKQIQE
DNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVDTATLSSLKR
FMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEKECQREEWIC
QLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETLREVKINQVL
F

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaL YP_216420.1 secretion system apparatus protein SsaL Virulence SPI-2 Protein 1e-126 99
ssaL NP_460377.1 type III secretion system apparatus protein Virulence SPI-2 Protein 2e-127 99
ssaL CAA70534.1 secretion system apparatus Virulence SPI-2 Protein 1e-127 99
ssaL NP_456116.1 putative secretion system protein Virulence SPI-2 Protein 8e-124 98
ssaL NP_805083.1 secretion system protein Virulence SPI-2 Protein 8e-124 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_02028 YP_006087662.1 Type III secretion cytoplasmic protein (YscL) VFG0512 Protein 8e-128 99