Gene Information

Name : PADK2_01080 (PADK2_01080)
Accession : YP_006480213.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 240217 - 241707 bp
Length : 1491 bp
Strand : +
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
GTGTTCGAACTCAGCGATTGGCAACGGCGCGCCGCGACACAGCGCTTCATCGACCAGGCCCTGATCGGCGGCCGCCAGCG
TCCAGCCGCCAGCGGCGCTACCTTCGACGCCATCGATCCGGCGAGCAATCGCCTGCTGGCGCGGGTCGCGGCCTGCGATG
CGGCCGACGTCGACGCGGCAGTGGCCGCCGCCCGCCGCGCCTTCGACGAAGGCCCCTGGGCGCGTCTCGCCCCGGTCGAG
CGCAAGCGCGTGCTGCTGCGCCTGGCCGAGCTGATGCTGGCCCATCGCGAAGAGCTGGCGCTGCTCGACTCGCTGAACAT
GGGCAAGCCGGTGATGGACGCCTGGAACATCGATGTACCCGGCGCCGCCCACGTCTTCGCCTGGTATGCGGAAAGCCTCG
ACAAGCTCTACGACCAGGTCGCGCCGGCCGCCCAGCAGACCCTGGCCACCATTACCCGCGTGCCGCTGGGGGTGATCGGC
GCGGTGGTGCCGTGGAACTTCCCGCTCGACATGGCCGCCTGGAAGCTCGCCCCGGCCCTGGCCGCCGGCAACTCGGTGGT
GCTCAAGCCGGCCGAGCAGTCGCCGTTCTCCGCCCTGCGCCTGGCCGAGCTGGCCCTGGAGGCGGGGGTGCCGGAAGGCG
TGCTGAACGTGGTGCCGGGCCTCGGCGAGCAGGCCGGCAAGGCCCTCGGCTTGCACCCGGAGGTGGACGCACTGGTGTTC
ACCGGCTCCACCGAGGTCGGCAAGTACTTCATGCAGTATTCCGCGCAATCCAACCTCAAGCAGGTCTGGCTGGAGTGCGG
CGGTAAGAGTCCGAACCTGGTGTTCGCCGATTGCCGCGATCTTGACCTGGCGGCGGAAAAGGCCGCCTTCGGCATTTTCT
TCAATCAGGGCGAGGTCTGTTCGGCGAACTCGCGCTTGCTGGTGGAGCGTTCGATCCACGACGAGTTCGTCGAGCGCCTG
CTGGCCAAGGCCCGCGACTGGCAGCCGGGCGATCCGCTGGACCCGGCCAGCCGCGCCGGCGCCATCGTCGACCGCCGGCA
GACCGCCGGGATTCTCGCCGCCATCGAGCGGGCGCAAGGCGAGGGCGCGACCCTGCTCGGCGGTGGCCGCCAGTTGACGA
TCAACGGTTCGGACAACTTCATCGAACCGACCCTGTTCGGCGACGTACGCCCGGACATGCAGCTGGCCCGCGAGGAAATC
TTCGGCCCGGTGCTGGCGATCAGCGCCTTCGACTCCGAGGACGAGGCCATACGCCTGGCCAACGACAGCCGCTACGGCCT
CGCCGCCTCGCTGTGGAGCGACGACCTGCACCGTGCGCACCGGGTGGCGCGGCGCTTGAATGCCGGAACGGTGTCGGTGA
ATACCGTGGACGCGCTGGACGTCGCGGTGCCTTTCGGCGGCGGCAAGCAGTCCGGCTTCGGTCGCGACCTGTCGCTGCAT
TCCTTCGACAAGTACACCCAGTTGAAGACGACCTGGTTCCAGTTGCGCTGA

Protein sequence :
MFELSDWQRRAATQRFIDQALIGGRQRPAASGATFDAIDPASNRLLARVAACDAADVDAAVAAARRAFDEGPWARLAPVE
RKRVLLRLAELMLAHREELALLDSLNMGKPVMDAWNIDVPGAAHVFAWYAESLDKLYDQVAPAAQQTLATITRVPLGVIG
AVVPWNFPLDMAAWKLAPALAAGNSVVLKPAEQSPFSALRLAELALEAGVPEGVLNVVPGLGEQAGKALGLHPEVDALVF
TGSTEVGKYFMQYSAQSNLKQVWLECGGKSPNLVFADCRDLDLAAEKAAFGIFFNQGEVCSANSRLLVERSIHDEFVERL
LAKARDWQPGDPLDPASRAGAIVDRRQTAGILAAIERAQGEGATLLGGGRQLTINGSDNFIEPTLFGDVRPDMQLAREEI
FGPVLAISAFDSEDEAIRLANDSRYGLAASLWSDDLHRAHRVARRLNAGTVSVNTVDALDVAVPFGGGKQSGFGRDLSLH
SFDKYTQLKTTWFQLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-107 54
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-57 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-57 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-57 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-57 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-57 42
hpaE AAO17179.1 HpaE Not tested tcd island Protein 5e-57 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_01080 YP_006480213.1 aldehyde dehydrogenase VFG0082 Protein 2e-57 42