Gene Information

Name : cusR (PFLU1576)
Accession : YP_002871217.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : heavy metal two component system, response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1729386 - 1730066 bp
Length : 681 bp
Strand : -
Note : Also similar to PFLU4171, (224 aa); E(): 2.5e-44; 58.904% identity in 219 aa overlap

DNA sequence :
ATGAAACTGCTGATCGTCGAAGACCAACCCAAAACCGGCCAGTACCTGCGCCAGGGCCTGACGGAGGCGGGGTTTACCAC
CGAACTGGTGGCCGACGGTACCAGCGGTCAGCACCTGGCACTGACCGGCGCCTACGACCTGTTGATCCTCGATGTGATGC
TGCCGGGCCGTGATGGCTGGCAGATCCTCCAGGCCGTGCGCACGGCAGGCCTGGACATCCCGGTACTGTTCCTGACCGCC
CGCGACGCCGTGGAAGACCGCGTGCACGGCCTGGAACTGGGTGCCGACGATTACTTGGTCAAACCCTTCGCCTTCTCCGA
ACTGCTGGCGCGCGTGCGCAGCCTGTTGCGCCGTGGCAGCAGCACGCCGCAGGAAACCGCCTTGCAACTGGCCGATTTGC
GCCTGGACCTGATCCGCCGTCGCGTCGAGCGGGACGGCCAGCGCATCGACCTGACGGCCAAGGAGTTTTCCCTGCTCGAA
CTGCTGCTGCGCCGCCAGGGCGAAGTGCTGCCCAAATCGCTGATCGCCTCCCAGGTGTGGGACATGAACTTCGACAGCGA
CACCAACATTATCGAAGTGGCAATCCGCCGCCTGCGCCTGAAAGTCGACGATAACTTCCCGAATAAATTGATCCACACCG
TGCGCGGCATGGGTTATGTGCTGGAGGAGCGCGTCAATTGA

Protein sequence :
MKLLIVEDQPKTGQYLRQGLTEAGFTTELVADGTSGQHLALTGAYDLLILDVMLPGRDGWQILQAVRTAGLDIPVLFLTA
RDAVEDRVHGLELGADDYLVKPFAFSELLARVRSLLRRGSSTPQETALQLADLRLDLIRRRVERDGQRIDLTAKEFSLLE
LLLRRQGEVLPKSLIASQVWDMNFDSDTNIIEVAIRRLRLKVDDNFPNKLIHTVRGMGYVLEERVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-53 59
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-52 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cusR YP_002871217.1 heavy metal two component system, response regulator BAC0083 Protein 7e-69 71
cusR YP_002871217.1 heavy metal two component system, response regulator BAC0638 Protein 4e-63 71
cusR YP_002871217.1 heavy metal two component system, response regulator BAC0197 Protein 2e-62 67
cusR YP_002871217.1 heavy metal two component system, response regulator BAC0111 Protein 4e-65 65
cusR YP_002871217.1 heavy metal two component system, response regulator BAC0308 Protein 2e-61 63
cusR YP_002871217.1 heavy metal two component system, response regulator BAC0125 Protein 1e-59 60
cusR YP_002871217.1 heavy metal two component system, response regulator BAC0347 Protein 1e-57 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cusR YP_002871217.1 heavy metal two component system, response regulator VFG0596 Protein 2e-53 59
cusR YP_002871217.1 heavy metal two component system, response regulator VFG1390 Protein 5e-36 44
cusR YP_002871217.1 heavy metal two component system, response regulator VFG0473 Protein 2e-28 41
cusR YP_002871217.1 heavy metal two component system, response regulator VFG1389 Protein 2e-29 41