Gene Information

Name : Gdia_2157 (Gdia_2157)
Accession : YP_002276530.1
Strain : Gluconacetobacter diazotrophicus PAl 5
Genome accession: NC_011365
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2386212 - 2386892 bp
Length : 681 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI1456 two-component response regulator

DNA sequence :
ATGCATATCCTGGTCGTCGAGGATGATCCGACCGTCCGCAATTTCGTCGCCAAGGGCCTGCGCGAGGCCGGGCACCTGGT
CGAGCCGGTGGACAACGGCAAGGACGGGCTGTTCCTGGCGGTCAGCGAGAATTTCGACCTGATCATCCTGGACCGCATGC
TACCGGGCGGGATCGACGGGCTGCGGCTGCTGGAAACCATCCGCGCGCAGAACAACAGCACGCCGGTCCTGCTGCTGTCG
GCGCTGGCGGACGTGGATGACCGCGTGCAGGGCCTGAAGGCCGGCGGCGACGATTACGTCACCAAGCCCTTCGCCTTCAG
CGAATTGCTGGCCCGGGTCGAGGCCCTGTCGCGCCGGGGGCGCAGCGACAACGCGCCGCTGACGCGCCTGAACGTGGCGG
ACCTGGAAATCGACCTGCTGTCGCGGTCGGTCCGCCGCGGCGGGCAGCGCATCGACCTGCAGCCCCGCGAATTCCGGCTG
CTGGAATACCTGATGCGCCATGCCGGCCAGGTCGTGACGCGCACCATGCTGCTGGAAGGCGTGTGGGACTATCATTTCGA
CCCGCAGACCAACGTCATCGACGTCCATGTGTCCCGCCTGCGCCAGAAGGTGGACAAGCCGTTCGATACCCCCCTGATCC
ATACCATCCGCAACGCCGGCTACATGCTGCGGGCGGAATAG

Protein sequence :
MHILVVEDDPTVRNFVAKGLREAGHLVEPVDNGKDGLFLAVSENFDLIILDRMLPGGIDGLRLLETIRAQNNSTPVLLLS
ALADVDDRVQGLKAGGDDYVTKPFAFSELLARVEALSRRGRSDNAPLTRLNVADLEIDLLSRSVRRGGQRIDLQPREFRL
LEYLMRHAGQVVTRTMLLEGVWDYHFDPQTNVIDVHVSRLRQKVDKPFDTPLIHTIRNAGYMLRAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-41 47
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-40 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gdia_2157 YP_002276530.1 winged helix family two component transcriptional regulator BAC0125 Protein 3e-45 51
Gdia_2157 YP_002276530.1 winged helix family two component transcriptional regulator BAC0638 Protein 7e-41 51
Gdia_2157 YP_002276530.1 winged helix family two component transcriptional regulator BAC0083 Protein 2e-45 49
Gdia_2157 YP_002276530.1 winged helix family two component transcriptional regulator BAC0111 Protein 3e-47 49
Gdia_2157 YP_002276530.1 winged helix family two component transcriptional regulator BAC0347 Protein 1e-43 48
Gdia_2157 YP_002276530.1 winged helix family two component transcriptional regulator BAC0197 Protein 1e-41 48
Gdia_2157 YP_002276530.1 winged helix family two component transcriptional regulator BAC0308 Protein 2e-41 45
Gdia_2157 YP_002276530.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gdia_2157 YP_002276530.1 winged helix family two component transcriptional regulator VFG0596 Protein 3e-41 47
Gdia_2157 YP_002276530.1 winged helix family two component transcriptional regulator VFG1389 Protein 2e-31 42
Gdia_2157 YP_002276530.1 winged helix family two component transcriptional regulator VFG1390 Protein 9e-34 41