Gene Information

Name : GU3_10755 (GU3_10755)
Accession : YP_005092657.1
Strain : Oceanimonas sp. GK1
Genome accession: NC_016745
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator, winged helix family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2338439 - 2339116 bp
Length : 678 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGAAACTGCTGATCATCGAAGATGAACAAAGCACCGGCGATTATCTGCAAAAGGGCCTGCGCGAAGCGGGCTTTGTGGT
AGATCTGGTGCGCAACGGGCTGGACGGCCTGCACCAGGCCAGCGCCGAGCCTTACGATCTGCTGGTGATGGATGTGATGC
TGCCGGGTCTGGACGGCTGGCGCATTGTGGCGGCACTGCGCGAGCAGGGTCTGCCCACGCCGGTGCTGTTGTTAACCGCC
CGGGACAGCGTGGAGGACAGGGTGCGTGGCCTGGAGTTGGGCGCCGACGATTACCTGGTCAAGCCCTTTGCCTTTGCCGA
GCTGCTGGCCCGGGTGCGCAGCCTGCTACGCCGGGGCGCGCCCCGCCAGGACGAGCACAAACTGCAGGTGGCCGATCTGG
TGCTGGACCTGCCCCGGCGTCTGGCGAGTCGGGCCGATACGCCCATTCACCTCACCAACAAGGAATTTGCCCTGCTGGAG
CTGCTGGTGCGCCGGCGGGGCGAAGTGCTGCCCCGCTCGCTGATCGCCTCCCTGGTGTGGGACATGAACTTTGACAGCGA
CACCAATGTGATTGATGTGTCCATTCGCCGGCTGCGCAGCAAGATAGACGACGGTTTTGAACCCAGGCTTATTCACACCA
TCAGGGGCATGGGCTACACCCTGGATACCGACAGGTAG

Protein sequence :
MKLLIIEDEQSTGDYLQKGLREAGFVVDLVRNGLDGLHQASAEPYDLLVMDVMLPGLDGWRIVAALREQGLPTPVLLLTA
RDSVEDRVRGLELGADDYLVKPFAFAELLARVRSLLRRGAPRQDEHKLQVADLVLDLPRRLASRADTPIHLTNKEFALLE
LLVRRRGEVLPRSLIASLVWDMNFDSDTNVIDVSIRRLRSKIDDGFEPRLIHTIRGMGYTLDTDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-50 57
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-49 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GU3_10755 YP_005092657.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0083 Protein 2e-63 67
GU3_10755 YP_005092657.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0638 Protein 1e-58 66
GU3_10755 YP_005092657.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0111 Protein 7e-62 65
GU3_10755 YP_005092657.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0308 Protein 7e-59 65
GU3_10755 YP_005092657.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0197 Protein 5e-60 65
GU3_10755 YP_005092657.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0125 Protein 2e-57 61
GU3_10755 YP_005092657.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0347 Protein 6e-54 59
GU3_10755 YP_005092657.1 two component heavy metal response transcriptional regulator, winged helix family protein NC_002516.2.879194.p Protein 2e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GU3_10755 YP_005092657.1 two component heavy metal response transcriptional regulator, winged helix family protein VFG0596 Protein 1e-50 57
GU3_10755 YP_005092657.1 two component heavy metal response transcriptional regulator, winged helix family protein VFG1389 Protein 1e-34 46
GU3_10755 YP_005092657.1 two component heavy metal response transcriptional regulator, winged helix family protein VFG1390 Protein 2e-37 44