Gene Information

Name : Aazo_2223 (Aazo_2223)
Accession : YP_003721342.1
Strain : Nostoc azollae 0708
Genome accession: NC_014248
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2313227 - 2313916 bp
Length : 690 bp
Strand : -
Note : KEGG: ava:Ava_3453 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein

DNA sequence : 
ATGCACATTTTGTACATCGAAGACGAAGCGAAAATTGCCAACTTCGTCTGTGCAGGATTGAAAGAACAAGGTTTTGTTGT
CGATTATATTGATAATGGCGATGAAGGTTATTACCGGGCAATGGAAAACGAATATGATGTTATTGTACTAGATATCATGT
TACCAGGCAAAGACGGACTAGCAATTTTGAAAAGCTTGCGTCGCGCTGGACGTAATTTACCAGTAATATTATTAACTGCT
CGTAATGAACTAGATGATCGGCTAGAAGGATTAAATTTAGGTGCAGATGATTACTTATCCAAACCGTTTTTTGTTGAAGA
ATTAATAGCCAGAATTCATGCAGTTATTCGTCGCATATCTGGAGAACGTCAAAACATCCTCCGCGTCGGTTCTCTTGCAT
TAGATCGGATTACCCGCGAAGTAACCTGTAATTATCAATTAGTAGAATTAACTACTCGTGAATTTAACTTATTAGAATAT
TTAATGCGTTCTCCTGGTAGGGTATTTACCCGGACACAAATTCTCGAACACGTTTGGGGTTATGATTTCAATCCTAATAC
TAATTTAGTCGATGTTTGCGTACAAAGATTGCGAAAAAAAATTGAAAAAGTCGCAGGTGATAGTTGGATTGATAGCGTGC
GTAGTGTTGGTTATTTATTTCGTAAATCAGGAAAAATAGGTGATATCTGA

Protein sequence : 
MHILYIEDEAKIANFVCAGLKEQGFVVDYIDNGDEGYYRAMENEYDVIVLDIMLPGKDGLAILKSLRRAGRNLPVILLTA
RNELDDRLEGLNLGADDYLSKPFFVEELIARIHAVIRRISGERQNILRVGSLALDRITREVTCNYQLVELTTREFNLLEY
LMRSPGRVFTRTQILEHVWGYDFNPNTNLVDVCVQRLRKKIEKVAGDSWIDSVRSVGYLFRKSGKIGDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-35 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aazo_2223 YP_003721342.1 winged helix family two component transcriptional regulator BAC0125 Protein 2e-43 45
Aazo_2223 YP_003721342.1 winged helix family two component transcriptional regulator BAC0197 Protein 7e-45 45
Aazo_2223 YP_003721342.1 winged helix family two component transcriptional regulator BAC0347 Protein 8e-43 44
Aazo_2223 YP_003721342.1 winged helix family two component transcriptional regulator BAC0111 Protein 1e-44 44
Aazo_2223 YP_003721342.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 3e-35 42
Aazo_2223 YP_003721342.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aazo_2223 YP_003721342.1 winged helix family two component transcriptional regulator VFG0596 Protein 4e-36 43
Aazo_2223 YP_003721342.1 winged helix family two component transcriptional regulator VFG1389 Protein 3e-35 43
Aazo_2223 YP_003721342.1 winged helix family two component transcriptional regulator VFG1390 Protein 1e-38 41