Gene Information

Name : ECABU_c02320 (ECABU_c02320)
Accession : YP_006104372.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 246084 - 246434 bp
Length : 351 bp
Strand : +
Note : -

DNA sequence :
ATGATCTCACTCCCATCAGGTACCCGCATCTGGCTCGTGGCCGGCGTTACCGATATGCGTAAATCCTTCAACGGTCTGGG
AGAACAGGTACAACATGTGCTGGATGAGACCCCCTTCTCAGGTCACCTGTTTATCTTTCGTGGCCGACGGGGTGACACTG
TTAAAATACTCTGGGCCGATGCTGATGGTCTGTGCCTGTTCACCAAACGCCTGGAGGAAGGCCAGTTTATCTGGCCTGCG
GTGCGTGACGGTAAGGTATCCATTACCCGCTCGCAACTGGCAATGCTCCTCGATAAGCTGGACTGGCGTCAGCCAAAAAC
ATTCCGCCTTAACTCACTGACAATGTTGTAA

Protein sequence :
MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLDETPFSGHLFIFRGRRGDTVKILWADADGLCLFTKRLEEGQFIWPA
VRDGKVSITRSQLAMLLDKLDWRQPKTFRLNSLTML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 5e-49 97
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 5e-49 97
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 6e-48 95
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 6e-48 95
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 9e-49 94
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 3e-38 70
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-38 70
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 8e-38 69
unnamed AAL08461.1 unknown Not tested SRL Protein 1e-35 68
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 2e-35 67
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-35 67
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 3e-35 67
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-35 67
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 2e-35 67
unnamed AAC31493.1 L0014 Not tested LEE Protein 2e-35 67
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 2e-35 67
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 2e-35 67
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 2e-35 67
unnamed AAL99258.1 unknown Not tested LEE Protein 2e-35 67
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-26 67
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 1e-34 66
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 1e-34 66
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 7e-35 64
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 7e-35 64
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 1e-27 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c02320 YP_006104372.1 putative transposase VFG1737 Protein 3e-49 94
ECABU_c02320 YP_006104372.1 putative transposase VFG1665 Protein 3e-38 69
ECABU_c02320 YP_006104372.1 putative transposase VFG1052 Protein 4e-36 68
ECABU_c02320 YP_006104372.1 putative transposase VFG1709 Protein 6e-36 67
ECABU_c02320 YP_006104372.1 putative transposase VFG0792 Protein 6e-36 67
ECABU_c02320 YP_006104372.1 putative transposase VFG1698 Protein 8e-36 67
ECABU_c02320 YP_006104372.1 putative transposase VFG1517 Protein 8e-27 67